KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_2892
Entry
VPUCM_2892        CDS       T03116                                 
Name
(GenBank) Cyclic AMP receptor protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vph  Vibrio parahaemolyticus UCM-V493
Pathway
vph02020  Two-component system
vph02024  Quorum sensing
vph05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vph00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VPUCM_2892
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VPUCM_2892
   05111 Biofilm formation - Vibrio cholerae
    VPUCM_2892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vph03000]
    VPUCM_2892
Transcription factors [BR:vph03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    VPUCM_2892
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp RepL HTH_24 HTH_23 MarR MarR_2 Sigma70_r4 HTH_36 HTH_11 Exonuc_VII_L HTH_28 HTH_7
Other DBs
NCBI-ProteinID: AHJ00851
LinkDB
Position
1:3139124..3139756
AA seq 210 aa
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEDQERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQ
MARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEEQNLISAHGKTIVVYGTR
NT seq 633 nt   +upstreamnt  +downstreamnt
atggttctaggtaaacctcaaaccgacccaacattagagtggtttctttcacactgtcat
attcataagtacccatcaaagagcacgctaattcacgcaggtgaaaaagctgaaacgttg
tactacatcgttaaaggctctgttgcggttcttatcaaggacgaagaaggtaaggaaatg
attctttcttacctaaaccaaggtgactttattggtgaacttggtctattcgaagaagac
caagagcgtacagcttgggttcgcgctaaatctccttgtgaagttgctgaaatttctttc
aagaaattccgtcagcttatccaagtaaacccagacatcctaatgcgtctttctgcgcag
atggctcgtcgtcttcaagtaactagccaaaaagtgggtgacctagcgttcctagacgta
actggtcgtatcgctcagacgcttctgaaccttgctaaacaaccagatgcgatgactcac
ccagacggcatgcaaatcaagatcactcgtcaagaaatcggtcaaatcgttggctgttct
cgtgagacggtaggtcgtatcttgaagatgctagaagagcagaacctaatctctgcgcac
ggtaaaactatcgttgtttacggtactcgttaa

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