Vibrio parahaemolyticus UCM-V493: VPUCM_2950
Help
Entry
VPUCM_2950 CDS
T03116
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VPUCM_2950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vph03019
]
VPUCM_2950
03110 Chaperones and folding catalysts [BR:
vph03110
]
VPUCM_2950
03029 Mitochondrial biogenesis [BR:
vph03029
]
VPUCM_2950
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vph04147
]
VPUCM_2950
Enzymes [BR:
vph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VPUCM_2950
Messenger RNA biogenesis [BR:
vph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VPUCM_2950
Chaperones and folding catalysts [BR:
vph03110
]
Heat shock proteins
HSP60 / Chaperonin
VPUCM_2950
Mitochondrial biogenesis [BR:
vph03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VPUCM_2950
Exosome [BR:
vph04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VPUCM_2950
Exosomal proteins of other body fluids (saliva and urine)
VPUCM_2950
Exosomal proteins of breast cancer cells
VPUCM_2950
Exosomal proteins of colorectal cancer cells
VPUCM_2950
Exosomal proteins of bladder cancer cells
VPUCM_2950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHJ00909
LinkDB
All DBs
Position
1:complement(3200703..3202346)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVEQLKELSVECNDTKAIAQVGTISANSDASVGNIIAEAMERVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVELENPFILLVDKKISNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLELEKVTLEDLGQAKRVSITKENSTIIDGAGEEAMIQGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKIVDLEGDNEEQNVGIRVALRAMEAPIRQITKNAGDEDSVVANNVKAGEGSYGYNA
ATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKESAGMPDMGGMGG
MGGMGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaatgacgcacgagttaagatgctagaaggtgta
aacgttctggctgacgcagtgaaagtaacactgggtcctaaaggtcgtaacgtagttcta
gataaatctttcggtgctccaaccatcactaaagacggtgtatctgtagcgcgtgaaatt
gagctggaagacaagttccagaacatgggcgcgcaaatggttaaagaagtagcgtctaaa
gcaaacgacgctgcgggtgacggtacaacaacagcaaccgtactagcgcaagcaatcgtg
aatgaaggtctaaaagcagttgcagcgggtatgaacccaatggatcttaagcgtggtatc
gacaaagctgttgcagcggcagtagagcaactaaaagagctttctgttgagtgtaacgac
accaaagcaatcgcacaggttggtactatctctgcgaactctgacgcaagcgtaggtaat
atcattgctgaagcaatggaacgcgttggccgcgacggtgttatcactgttgaagaaggt
caggctctacaagacgagctagacgtagtagaaggtatgcagttcgatcgcggttaccta
tctccttacttcatcaacaaccaagaagcgggcagcgttgagctagaaaacccattcatc
cttctagttgataagaagatctcaaacatccgtgagcttctaccaactctagaagcagta
gcaaaagcatctcgtccactgctaatcatcgcagaagacgtagaaggcgaagcactagcg
acattggttgtgaacaacatgcgtggcatcgtgaaagttgctgcggttaaagcgcctggt
tttggtgaccgtcgtaaagcaatgctacaagacatcgctatcctgactggcggtactgtg
atttctgaagaaatcggtctagaactagaaaaagtaacgcttgaagatctaggtcaggct
aagcgtgtaagcattacgaaagaaaactcaaccatcatcgatggtgcgggtgaagaagcg
atgatccaaggccgcgttgctcaaattcgtcaacaaatcgaagacgcaacttcagactac
gacaaagagaaactacaagagcgcgttgctaaactggctggcggtgttgcagtaatcaaa
gttggtgcagcgactgaagttgaaatgaaagagaaaaaagaccgcgtagaagacgcgcta
cacgcgactcgcgcagcggttgaagaaggcgtagttgctggtggtggtgttgcactaatc
cgcgctgcatctaagattgttgacctagaaggcgacaacgaagaacaaaacgttggtatc
cgcgttgcgcttcgcgcaatggaagcgccaatccgtcaaatcacgaagaacgcaggtgac
gaagactctgttgttgcgaacaacgtgaaagcgggtgaaggttcttacggctacaacgca
gcgacgggtgaatacggcgacatgctagagatgggtatcctagacccaactaaagtaact
cgtagcgctctacaatttgcagcgtctgtcgctggtctaatgatcacaacagaagcgatg
gtaactgacctaccacaaaaagaaagtgcaggcatgcctgacatgggtggtatgggcggt
atgggtggcatgggcatgatgtaa
DBGET
integrated database retrieval system
