Vibrio parahaemolyticus UCM-V493: VPUCM_2987
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Entry
VPUCM_2987 CDS
T03116
Name
(GenBank) Lysine decarboxylase, inducible
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00310
Lysine degradation
vph01100
Metabolic pathways
vph01110
Biosynthesis of secondary metabolites
vph01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
VPUCM_2987
Enzymes [BR:
vph01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
VPUCM_2987
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Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
Motif
Other DBs
NCBI-ProteinID:
AHJ00946
LinkDB
All DBs
Position
1:complement(3253251..3255386)
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AA seq
711 aa
AA seq
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MNIFAILNHMGVFFKEEPVRQLHAALEKAGYEVVYPVDDKDLIKMIEMNPRICGVLFDWD
KYSLELCERISQINEKLPVHAFANEQSTLDISLTDLRLNVSFFEYALGMADDIAIKINQA
TEAYKDAIMPPFTKALFKYVEEGKYTFCTPGHMGGTAFQKSPAGSIFYDFYGPNTFKADV
SISMPELGSLLDHSGPHKDAEEYIARTFNADSSYIVTNGTSTSNKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFSRDVIAEKVAKTPGATAPSY
AVVTNSTYDGLLYNTQFIKESLDCKHIHFDSAWVPYTNFNPIYEGKCGMSGEAMPGKVFY
ETQSTHKLLAAFSQASMIHVKGDFDKESFNEAFMMHTSTSPQYGIVASTETAAAMMRGNT
GKKLMQDSIDRAIRFRKEIKRLEAESDSWFFDVWQPENIDTTECWKLDPSDTWHGFKNMD
DNHMYLDPIKVTLLTPGMNKEGELEESGIPASLVAKFLDERGIVVEKTGPYNLLFLFSIG
IDKSKAMQLLRGLTEFKRGYDLNLTIKSFLPSLYNEDPSFYEGMRVQELAQAIHDLTKKY
NLPELMYKAFDVLPEMKVTPHAAWQEELRGNVEEIKLEEMVGRVSANMILPYPPGVPLVL
PGEMVTQESRPVLDFLEMLCEIGAHYPGFETDIHGLYQQKDGSYTVKVLKN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttcgctatcttgaaccacatgggtgtgttctttaaagaagagccagttcgt
caacttcacgctgctcttgagaaagcgggctacgaagtggtttacccagtagatgataaa
gacttgatcaaaatgattgagatgaacccacgcatttgcggtgtgctgttcgactgggat
aaatactcactagagctatgtgaacgtattagccaaatcaacgaaaaactgcctgttcac
gcatttgctaacgaacagtctactctcgatatttcactaacagacctacgtctgaacgtg
agcttcttcgagtacgctttaggtatggctgacgacatcgctatcaaaatcaaccaagcg
accgaggcatacaaagatgccatcatgcctccattcactaaagcgctattcaaatacgta
gaagaaggtaaatacaccttctgtactccaggtcacatgggtggtactgcattccagaaa
agccctgctggtagcatcttctacgatttttatggtccaaatacatttaaagcggacgta
tcaatctcaatgcctgagctaggttctctactagaccactcaggtccacataaagatgca
gaagaatacatcgcacgcacattcaatgcagacagttcttacatcgtaactaacggtacg
tctacatcgaacaaaatcgttggtatgtactcagcacctgcgggtagcacagtactgatt
gaccgtaactgtcacaaatctctgactcacctaatgatgatgagcgacgtgacaccaatc
tacttccgcccaactcgtaacgcatacggcatccttggtggtattccacaaagcgaattc
agccgtgatgtcattgcagagaaagtggcgaaaacaccaggtgcaacagcgccaagttac
gcagtagtgactaactcaacttacgatggtctgttgtacaacacacaattcatcaaagag
tcgctagactgtaaacacatccacttcgacagtgcttgggtgccttacactaacttcaac
ccaatttacgaaggtaaatgtggtatgagtggtgaagcgatgccaggcaaagtgttctac
gagacacaatcaacacacaaactgttggcagcgttctcacaagcttcaatgattcacgtg
aaaggtgactttgataaagagtctttcaacgaagcattcatgatgcacacttcaacttca
cctcagtacggcattgttgcttctactgaaactgcagcggcaatgatgcgcggcaacact
ggtaagaagttgatgcaagactctatcgatcgcgcaattcgcttccgtaaagagatcaaa
cgcctagaagcagaaagtgacagctggttcttcgatgtatggcaaccagaaaacatcgat
accacagaatgttggaaactagaccctagcgatacatggcacggcttcaagaacatggat
gacaaccacatgtatcttgacccaatcaaagtcacgctactgactccggggatgaataaa
gaaggcgaactagaagaatcaggtattcctgcttcgctggtggctaaattcctagacgag
cgcggcatcgtggttgagaaaacaggcccatacaacttgttgttcctattctcaatcggt
atcgacaaatcaaaagcaatgcaattactacgcggtctgactgaatttaaacgtggctac
gacttgaacctaaccatcaagagcttccttccttcgctatataacgaagatccaagcttc
tatgaaggcatgcgcgttcaagaattggcacaagcaattcatgacctaactaagaaatac
aacctaccagaactaatgtacaaagcgttcgatgttcttccagaaatgaaagtaacacca
cacgcagcatggcaagaagagcttcgcggtaacgtagaagaaatcaaactggaagaaatg
gttggtcgcgtaagtgcgaacatgatccttccttaccctccaggtgtgccactagtactt
cctggtgaaatggtgactcaagagtctcgcccagtgctggacttcctagagatgctttgt
gagatcggtgcgcattacccaggtttcgaaaccgatatccacggtctgtaccaacaaaaa
gatggtagctacaccgtaaaagtattgaagaactaa
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