Vibrio parahaemolyticus UCM-V493: VPUCM_3056
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Entry
VPUCM_3056 CDS
T03116
Name
(GenBank) putative signal transduction protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VPUCM_3056
Enzymes [BR:
vph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VPUCM_3056
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Gene cluster
GFIT
Motif
Pfam:
EAL
HDOD
Motif
Other DBs
NCBI-ProteinID:
AHJ01015
LinkDB
All DBs
Position
1:complement(3330745..3331968)
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AA seq
407 aa
AA seq
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MNTTYVARQPIFNRKRQTLGYELLFRDGESNAYPAHIESNRATYRLIVENFLSLGTNPVI
ASSRCFINFPHQSLVRRLPRSLPKNKIVVEVLETCQPTDDLLDAIRELYREGYLIALDDF
TLTPEWRRFLPYVHIVKLDIMAMGLEKACELVKTHLAKRVKYHFLAERVETAEEFEQAKA
AGFKFFQGYFFSKPLVSQTKYVSPEQVLALQLFREVCAPEPDFDRIESIITQDVALSYKL
LRFVNTQITTLEVEISSFRQALIYLGQDKLKQFVSLVVASYISSNKPRELYNLSLQRAQF
CELMSRYQPFSHLNEQGFMVGLLSILDAMLDLSIEALVKQLPLSDSVQQALLHRKGEYGV
LISLEECYERADWHGVEKLSGQLGLSFDEVKASLSEAVRWSQSVVTV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaacgtatgtcgctcgtcagccgatttttaaccgtaaaagacagacgctgggt
tatgaattgttatttagagatggagaaagcaacgcctatcccgctcatatcgaatcaaac
cgagcgacataccgattaatcgtcgagaactttctatcactgggtactaacccagtgatt
gcgtcttcgcgctgctttatcaactttcctcatcagagcttggtacgccgtttgcctcgc
agcttgccaaaaaacaaaatcgtcgtagaagtcttagagacttgccaacctaccgatgat
cttctcgatgcaattcgcgagttatatcgagaaggttatttgatcgcgctggatgatttc
accttaacgccggagtggcgtcgcttcttaccttatgtgcacatcgttaaactcgatatc
atggcgatggggctagaaaaagcgtgtgaactggttaaaacccacctcgccaagcgcgtc
aaatatcactttttagcggaacgcgtcgaaaccgcagaagagtttgagcaagccaaagcg
gcgggttttaaattctttcaaggctacttttttagcaagccattggtgtcgcaaaccaaa
tacgtcagtccggagcaggtgttagcgttacaactgtttcgggaagtctgcgcgccagag
ccggattttgaccgcattgaaagcatcattacgcaagatgtggccttgtcgtacaagtta
ctgcgttttgtgaatacccagatcaccacattagaggtggaaatcagctcgttccgtcag
gcgctgatttaccttggtcaagacaagctgaagcaatttgtctctttggtggtggcgtct
tacatctcaagcaacaaaccgcgtgagttgtacaacctctctttgcaacgtgcccagttc
tgtgagctgatgtcgcgttaccaacctttttctcatcttaatgagcaaggctttatggtc
ggcttattgtcgatcttagatgccatgctcgacttatcgatcgaagccttggtgaagcaa
ctgccgttgagtgattctgtgcagcaagcgttactgcatcgcaagggtgaatacggcgtg
ctgatctcgctagaagaatgctacgagcgagcagattggcatggcgtcgaaaagctctcg
ggtcagttgggtttgtcattcgatgaagtcaaagcctcgttaagtgaagcggttcgctgg
agccaaagcgtcgtcacggtctaa
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