KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_3068
Entry
VPUCM_3068        CDS       T03116                                 
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
vph  Vibrio parahaemolyticus UCM-V493
Pathway
vph00300  Lysine biosynthesis
vph00470  D-Amino acid metabolism
vph01100  Metabolic pathways
vph01110  Biosynthesis of secondary metabolites
vph01120  Microbial metabolism in diverse environments
vph01230  Biosynthesis of amino acids
Module
vph_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vph00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    VPUCM_3068
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    VPUCM_3068
Enzymes [BR:vph01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     VPUCM_3068
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AHJ01027
LinkDB
Position
1:complement(3343377..3344630)
AA seq 417 aa
MDYFNYQDDGQLWAEDVPLQALAEQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV
KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDAKKVVFSGVGKTPAEMKRALELGI
KCFNVESEPELERLNKVAGELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP
EVYQFAQSLPNLNVQGIDCHIGSQLTSIDPFIDATDRLLALIDDLKAQGINIRHLDVGGG
LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVSPRNGEPQTYDLVGPICETGDFLGKDRALVLQE
GDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGNQSHLVRQREELTSLWQLEQILPE
NT seq 1254 nt   +upstreamnt  +downstreamnt
ttggattacttcaactatcaggatgatggccaactttgggccgaagacgtcccacttcaa
gctcttgccgagcaatatggcactcctctttacgtatattctcgagccacgctagagcgc
cactggaaggcgtttgatagtgctgtgggtcaacatcctcatcttgtgtgctacgcagta
aaagccaactcaaacttgggcgtactgaacgcgctggctcgtttgggttcgggttttgat
atcgtatctggtggtgaactagagcgtgtgattgctgcgggcggtgatgcgaagaaagtc
gtgttttctggggtgggtaaaacgccagcagaaatgaagcgcgcactagagcttggcatc
aagtgcttcaacgttgaatcagagccggaactcgaacgcttgaataaagttgcgggtgag
cttggtgtgattgcgcctatttcgctacgtattaacccagatgttgacgcgaaaactcac
ccttatatttcgactggtcttcgtgacaacaaatttggcattgcgtttgaccgcgcgcca
gaagtgtatcaattcgcccagagcttacctaatctgaatgtgcaaggtatcgactgccat
attggttctcagttaacgagcattgacccatttattgatgcaaccgaccgtttgctggct
ttgattgatgacctgaaagcacaaggcatcaacattcgtcacctcgacgttggtggtggt
ttaggcgtggtatatcgtgatgaattaccgcctcagccttctgattacgcgaaagcgttg
ttggggcgtcttgaaaatcatcaagacctagaactgatttttgaaccaggccgtgcgatt
gcagcaaatgccggtattttgctcactcgtgtggagttcctaaaacacaccgagcataaa
aactttgccatcattgatgcggcgatgaatgacttgatgcgtccagcactgtaccaagct
tggcaagatattgtgcctgtttcccctcgtaatggtgagccacaaacttacgatttggtt
ggcccgatttgtgaaactggtgacttcttgggtaaagatcgcgcgctcgttttgcaagaa
ggtgatctactcgcggttcgttcagcaggtgcctatggttttgtgatgtcttcgaactac
aatactcgtacccgagcggcagaagtaatggtggatggtaatcaaagccaccttgttcgc
cagcgtgaagagctgaccagtttgtggcagctggaacagattctaccggagtaa

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