KEGG   Vagococcus penaei: BW732_00130
Entry
BW732_00130       CDS       T04715                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
vpi  Vagococcus penaei
Pathway
vpi03030  DNA replication
vpi03430  Mismatch repair
vpi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BW732_00130
   03430 Mismatch repair
    BW732_00130
   03440 Homologous recombination
    BW732_00130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpi03032]
    BW732_00130
   03400 DNA repair and recombination proteins [BR:vpi03400]
    BW732_00130
Enzymes [BR:vpi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BW732_00130
DNA replication proteins [BR:vpi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BW732_00130
DNA repair and recombination proteins [BR:vpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BW732_00130
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon tRNA_anti_2 HHH_3 POT1
Other DBs
NCBI-ProteinID: AQP52779
UniProt: A0A1Q2D348
LinkDB
Position
21394..24726
AA seq 1110 aa
MTSQLFVLSAYSLLQSTNRLPDLVHQAKLRGYSSLALTDQHVMHGVIEFYQECLKQDIKP
IIGLTITYQSERFDDRVFSLNLYAKNLAGYHNLLKISSYQMEQKMSAHLRLTDITDWLSD
IVICTPWENSEFVALFQEKEYDLLPVVYREYLQLFQTRDWYHGLAYYQAEQTWREQFLQK
ISKISFPIVAMKKVAYLDAKDVFAVKVLHAIEAGTQVSYDDGVQSVGNNYLMKEEDFSNQ
YQLNQATDALSNLERIVNQCNVKIPLHQTLLPAFPVPKDTTAANYLKELCFSGLARIGQQ
DNSAYLQRLEYELDVIHTMGYDDYFLIVWDVMAYAREHEIVTACRGSAAGSLVSYVLQIT
NVDPIAYQLLFERFLNQERYTMPDIDMDIPDNRREEILNYVYDKYGYHRVAQIATFGTLA
AKMALRDVARVFGLSQSEASKWANAIPSVLKITLAEALKTSKKLQQLVEFSDKNQLMFQV
ACQIEGLPRHVSTHAAGVVISDRELTDFVPLLAGSNNIPLTQFAMGEVETIGLLKMDFLG
LRNLAIIGNTLDAIEYVTGERLSLANIPVDDEPTLKLFRKGETVGVFQFESSGIKNVLKK
LGPTSIEDIASVNALYRPGPMQFIDQFIARKNGQQAVQYPAKSLEHILSKTYGIIVYQEQ
IMQIASKMAGFSLGQADILRRAISKKKKAVLDEERQHFVSGALKEGYPADVANEVYDYIE
RFANYGFNRSHAVVYSVLAYQMAYLKTHYSTYFFSALLHSVRNNPDKIKEYLAEAHKFDV
TILPPNINQSEYSFRLVKGKLVFGLSSIKGVRKDFIQHIIEVRKQDGAFSSLENFLIRIS
GKWLKAENILPLIYVGAFDHLHSNRKQLVTDLHGLIRNIDYSGGSMDLLGVLSLKTDKVS
DFSLNDKLQHEVTYLGTYVSGHPVEEYADLAKVYSVSTISDCVVNENITLLVYILSVKKI
RTKKGESMVFLKVTDQSSDLEVTIFPKLFRSLGLEIEANQVVLLSGKVELSQYTKEKQLI
ASRLEIAENKRQQLRSKKCYIKIAGLNDSTETLNELKKVFVQFSGRIPVVLIFKDRQQNI
LLEENYWIKDEPNFNKKVEDILGSETIIIK
NT seq 3333 nt   +upstreamnt  +downstreamnt
gtgacaagtcaattatttgttttatcagcgtattcactcttgcaaagtaccaatcgattg
cctgatttggttcaccaagcaaaattaagaggttattcaagtttagcgttaacagatcag
catgttatgcatggtgtaattgaattttatcaagaatgccttaagcaagatattaagcca
attattggattaactataacatatcagtcagaacgatttgatgatagggtatttagttta
aatttatatgcaaaaaatctagccggttatcataacttgctaaaaatatcgagttatcaa
atggaacaaaaaatgtcggctcatttgagactaactgatattacggattggctgtcagac
attgttatctgtacaccttgggaaaatagtgaatttgttgctttgtttcaagagaaagag
tatgatttactaccagttgtttatcgagaatatctgcagttatttcaaactagagactgg
tatcatgggctagcttattatcaagctgaacaaacttggcgtgagcaattcttacagaaa
atctcaaaaatcagctttccgattgtcgcaatgaaaaaagttgcttatttggatgctaaa
gatgtttttgctgtcaaggtcttacatgcgattgaagctggaacgcaagtttcttatgat
gacggtgttcaatccgtcggaaataactatttaatgaaggaagaagacttttctaatcaa
tatcaacttaatcaagcaacggacgccttgtccaatcttgaacgaattgttaatcaatgt
aacgtaaaaatcccattacatcaaacattattgcccgcttttccagtacctaaagacacg
acagctgcaaactacttaaaagaactgtgtttttctggtttagcgaggataggtcaacag
gacaatagtgcttatttacaacgattagagtatgaattagatgttatccatactatgggt
tatgatgattattttttaattgtttgggacgttatggcttatgctcgtgagcatgaaatt
gtaactgcttgccgtgggtcggctgctggttcattagtttcatatgttctacagattact
aacgtggaccccattgcctatcaattattatttgaacgttttttaaatcaagaacgttat
acaatgcctgatattgatatggatatcccagataaccgacgtgaagaaatattaaactat
gtttatgacaaatatggataccatcgagtcgctcagattgccacatttgggacattagct
gcaaaaatggctttacgcgatgtggctagggtttttggtttatcacaaagtgaagcaagt
aagtgggctaatgctattcctagtgtactaaaaattacattagccgaagcgttaaagaca
tctaaaaaattacaacagctagttgagttctctgataaaaatcaattaatgtttcaggtt
gcttgtcaaattgaaggcttgccacgacatgtctcaacgcatgctgctggagtcgttatt
agtgacagggaattgactgattttgtgccactactagctgggtctaataatattccttta
actcaatttgcgatgggggaagttgaaacaatcggtctattaaaaatggactttttaggt
ttaagaaatttggccattatcggtaataccttagatgctattgagtatgtaactggagaa
aggctaagtcttgctaatattccagtcgatgatgaaccaacgttaaaactgtttcgaaag
ggtgaaacagttggtgtatttcaatttgaatcttctggaattaaaaatgttttgaaaaaa
ttaggaccgacttcaattgaagatattgcgtcagttaacgcattgtatcgacctggtcca
atgcaatttattgaccaatttattgcacgtaaaaatggacaacaagctgttcaatatcca
gctaagagtttagaacacattttaagtaaaacttatggtatcattgtatatcaggaacaa
attatgcaaattgcttctaaaatggctggttttagcctaggtcaagctgatattttacgg
cgagcgattagcaagaagaaaaaagctgttttagatgaggagcggcagcatttcgtttcc
ggtgctttaaaggaaggatacccagctgatgtagcaaatgaggtctatgattatattgag
cgttttgctaattatggctttaaccgttcgcatgcggtagtatactcggtcttagcttat
caaatggcctatttaaaaacgcattatagtacatactttttttctgctttgctacattct
gtacgtaataatcctgataaaataaaagaatatttggcagaagctcataaattcgatgta
acaattcttccgccaaatattaatcagagtgaatatagttttcgcttggtaaaaggaaaa
ctagtttttggtctatcttcgatcaaaggtgtccgaaaagattttattcagcatattatt
gaagtacgtaaacaggacggtgcattctcatctcttgaaaatttcttaatccgaatcagt
ggtaaatggctaaaagctgaaaatattttgcccctgatttacgttggtgctttcgatcat
ttacatagtaatcgcaaacagctagtaactgatttgcatgggttaattcgtaatattgat
tatagtggtggcagtatggatctgctaggcgtcctaagtttaaaaacagataaggtaagt
gattttagtttaaatgacaagcttcagcatgaggtgacttacctaggcacttatgtttca
ggacatccagtcgaagagtatgctgacttagccaaagtttattcagtttcaacaattagt
gattgcgttgttaatgaaaatattacattacttgtatacattttgtcagtgaagaaaatt
cgaacgaaaaaaggtgagtccatggtctttttaaaggtaacagatcaaagtagtgatctt
gaagtgaccattttccctaagctatttcgaagtcttggactggaaatagaagctaatcaa
gttgtcttactatctggtaaagttgaattaagtcagtatacaaaagaaaaacagctcatt
gcttcacgattggaaatagctgaaaataaacgccaacaattgagaagtaaaaaatgttat
ataaagatagcgggattaaatgattctacagaaacactaaatgaattaaagaaagttttt
gtgcaattttctggaagaatacctgttgtcttaatatttaaggatagacagcaaaatatt
ttgttagaagaaaattattggattaaagatgaaccaaactttaacaaaaaagttgaagat
atcttaggctcagaaacaattattattaaatga

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