Vagococcus penaei: BW732_00235
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Entry
BW732_00235 CDS
T04715
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
vpi
Vagococcus penaei
Brite
KEGG Orthology (KO) [BR:
vpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpi03019
]
BW732_00235
03009 Ribosome biogenesis [BR:
vpi03009
]
BW732_00235
Enzymes [BR:
vpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BW732_00235
Messenger RNA biogenesis [BR:
vpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BW732_00235
Ribosome biogenesis [BR:
vpi03009
]
Prokaryotic type
rRNA helicases
BW732_00235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
CMS1
E1_UFD
Motif
Other DBs
NCBI-ProteinID:
AQP52798
UniProt:
A0A1Q2D365
LinkDB
All DBs
Position
47464..48810
Genome browser
AA seq
448 aa
AA seq
DB search
MNQFTDYQLESFILDALAEKNFTTPTEVQRKLIPVISKGKSVVGQSQTGSGKTHTFLIPL
MNKLDLTKNDVQIIVTTPSRELAEQIYQAALQIANHSETECRVASYVGGTDKKRQIEKLK
HQQPHVVVGTPGRILDLINHQALKTYTAKAFVVDEADMTLDMGFLEDVDQIAATLPNHLQ
MLVFSATIPIKLQPFLKKYMENPVVEHIKPSSVISDDIENWLISTKGQDVNRLVYNIVTV
GHPYLAMIFANTKQRVDEIANYLKEQGLKVATIHGDIPPRERKRVMKSVQNLDYQYVVAT
DLAARGIDIEGVSHVINAEIPNDLEFFIHRVGRTGRNGLKGIAISLYEPANEEQIAELEK
MGITFQPKVLKQGEFVESYDRNRRTKREKTQKQLDTKMVGLVKKKKKKVKPAYKKKLKFA
IAENDKQKRKVERRQTERSKRKSRKQDY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatttacagactatcaattagaatcgtttatattagatgcattagcagaaaaa
aactttaccacaccaaccgaagtacaaagaaaattaattccagtgatttcaaaagggaag
agcgttgttggtcaatcacaaacaggatcaggaaagacgcatacatttttaattccttta
atgaataagcttgatttaaccaaaaatgatgtacagatcattgttacaacgcctagccga
gaactagctgaacaaatttatcaagcagcgctacaaattgccaatcattcagaaacagag
tgccgcgtagcaagttatgttggtggaacagataaaaaacgtcagattgaaaaattaaaa
catcaacaaccacacgtagttgttgggacgccaggacgtatcttagatttaattaatcat
caagcgttaaaaacatatacagctaaagcttttgttgtcgatgaagctgacatgacatta
gatatgggatttttagaggacgttgaccaaatcgcagcaactttaccgaaccatttacaa
atgctcgttttctcagcaactattccaattaaattacaaccgttcttgaaaaaatatatg
gaaaatcctgtagttgaacatattaaaccaagttctgttatctcagatgacattgaaaat
tggctgatttcaactaaaggtcaagatgttaatcgtttggtttataacattgtgacagtt
ggacatccttatttagccatgatttttgcaaatactaaacagcgagtggacgaaatcgct
aattatttgaaagagcaaggcttaaaagtggcaactatccatggtgatattccaccacgt
gaacgtaaacgagtaatgaagtcagtccaaaacctagactatcaatatgtagttgcgacc
gatttagctgcacgtggaattgatattgaaggtgtttcacacgtcattaatgctgaaatt
ccgaatgatttagaattctttattcatcgtgttggacggactggacgtaatggattaaag
ggaattgctattagtttatacgagccagcaaatgaagagcaaattgctgagttagaaaaa
atgggaattactttccaacctaaagtgttaaaacaaggtgaattcgtcgaatcatatgat
cgaaaccgccgaacaaagcgtgaaaaaacgcaaaaacaattagatactaagatggttgga
ctggttaagaagaaaaagaaaaaagttaagcctgcttataagaagaagttgaaatttgca
atcgctgaaaatgataaacagaagcgaaaagttgaacgtagacagactgaacgttcaaaa
cgtaagtcacgtaagcaagattattaa
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