KEGG   Vagococcus penaei: BW732_00775
Entry
BW732_00775       CDS       T04715                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
vpi  Vagococcus penaei
Pathway
vpi03030  DNA replication
vpi03410  Base excision repair
vpi03420  Nucleotide excision repair
vpi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BW732_00775
   03410 Base excision repair
    BW732_00775
   03420 Nucleotide excision repair
    BW732_00775
   03440 Homologous recombination
    BW732_00775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpi03032]
    BW732_00775
   03400 DNA repair and recombination proteins [BR:vpi03400]
    BW732_00775
Enzymes [BR:vpi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BW732_00775
DNA replication proteins [BR:vpi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BW732_00775
DNA repair and recombination proteins [BR:vpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BW732_00775
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BW732_00775
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc STT3-PglB_core HHH_5
Other DBs
NCBI-ProteinID: AQP52900
UniProt: A0A1Q2D3F2
LinkDB
Position
complement(160171..162822)
AA seq 883 aa
MEKKKLLLVDGNSVAFRGFFALYQSLERFKNKHGLHTNALYAVNNMLENILEAEKPTHAL
IAFDAGKTTFRHAFYDEYKGGRSKTPSEFKEQMPYLRDLIEGFGLQHYELANYEADDIIG
TLAKQVASDEYEVVILTGDKDLLQLADDHITVKVTVKGVSEIESYTPEHIKEKYTLTPEQ
IVDMKGLAGDQSDNIPGVTKIGEKTAIKLLTQFGTVEGVYEHIDDLKKSKMKENLINEKE
TALLSKRLAKIDTQSPITISVDELDYKGKNLDKLVSFYQEMDFNSFLAKLDTSSIDIPVE
KKEDIVYTLVDVPTEEMFQSDMSLYIEMLEDNYHTSPIIGVAWGKQNHLYVATDDLIFDH
PLFKQWIENVDMTKKTYDMKRTYVALRRYNQQLKQVKFDALLAAYIVDSTNNSDDVAEVS
EKFGYHDVDRDEVIYGKGAKKGIPDDMSVFAEHLARKVLAIDYLYDKLSSELEEKEQVDL
FYQMELPLAKILADMEIEGITVDASRLVAMKGEFAERLKEIEQKVYTEAGEEFNLNSPKQ
LGVILFEKMKLPVIKKTKTGYSTAVDVLEKLQHEAPIIDYILEYRQLAKIQSTYVEGLLK
VIFADHKIHTRYLQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQAFVPRQKGWKLFSSDY
SQIELRVLAHISNDEHLKQAFINGEDIHAATAMRVFDIANPEDIDGNTRRQAKAVNFGVV
YGISDYGLSQNLGISRKEAKAFIDRYFEKYPGVKTYMESIVRDAKELGYVETLYHRRRYL
PDINSRNFNLRSFAERTAINTPIQGSAADILKIAMIKISERLKEENMQATMLLQVHDELV
FEAPEEEIEKLQQLVEETMAHAVDLHVPLLADSSVGDTWYDAK
NT seq 2652 nt   +upstreamnt  +downstreamnt
atggaaaaaaagaaattattattagttgatggtaatagcgtcgcttttcgcggttttttt
gctttgtaccaatcattagaacgatttaaaaataaacacgggttacacaccaatgcgctg
tatgccgttaataatatgctagaaaatattttagaagcagagaagcccactcatgcactg
attgcatttgatgcaggtaagacaacgtttaggcacgctttttatgatgaatacaaaggt
ggtcgttcgaaaactccaagtgaatttaaggaacaaatgccttatttaagagatttaatt
gagggttttggtttacaacattatgaattggcaaattatgaagccgatgatatcattggc
acgttagcgaaacaagtcgcatctgatgaatacgaagttgttattttaactggtgataag
gatttactccaattagcggatgatcacattaccgttaaagttacggttaaaggcgtgagt
gagattgaaagctacacaccagagcatattaaagaaaaatatacactaacgcctgaacaa
attgtggatatgaaaggcttagctggtgatcaatcagataacatccctggtgtgactaaa
atcggtgagaagacagcaattaaacttttaacgcaatttggaactgttgaaggagtttat
gagcacattgatgacttgaaaaaaagtaaaatgaaagaaaatctcattaatgaaaaagaa
acagcactattaagtaaacgattagctaagattgatacgcaaagtcccattacaatttca
gtcgatgaacttgattataaagggaagaacttggataaattagtgtctttctatcaagaa
atggactttaattctttcttagctaagctagatacatcatctattgatattccagttgaa
aaaaaagaagatatcgtctatacattagttgatgtaccaacagaagagatgtttcaatcg
gatatgtcactttatattgaaatgttggaagacaactatcatacatcgccaattattgga
gtagcatggggaaaacagaatcatctatatgtcgctacagatgatttgatttttgatcat
ccgctatttaaacaatggattgaaaatgttgatatgactaaaaaaacctatgatatgaaa
cggacctatgttgcattaagacgttataatcaacagcttaaacaagtgaaatttgatgcg
ctattggctgcttatatagttgattcaacgaataatagtgatgatgtcgctgaggtatct
gaaaaattcgggtatcatgatgttgatcgtgatgaagtcatctatggaaaaggagctaaa
aaaggcatcccagatgatatgagtgtctttgctgagcatttagcacgaaaagtattagcc
attgattatttatatgataaattatctagtgaattggaagaaaaagagcaagttgactta
ttttatcagatggaattacctttagctaaaattttagcagatatggaaatcgaaggaatc
accgtcgatgctagtcgccttgtggcaatgaagggggaatttgctgaacgcctaaaagaa
attgaacaaaaagtctacacagaagctggtgaggaatttaatttgaattcaccaaagcaa
ttaggtgtcattttgtttgaaaaaatgaaattacctgttattaaaaaaactaagaccggc
tattcgacagccgtcgacgtactagaaaaattacaacatgaagcaccaatcattgattat
attttagaatatcgtcaattggcgaaaattcaatcgacttatgttgaaggattactaaag
gttatttttgcggatcataaaattcacacacgttacttacaaactttgacgcaaacaggt
cgtttaagttctgttgaccccaacttacaaaatattccaattcgtttagaagaaggtcgt
aaaatacgtcaagcatttgtcccacgtcaaaaagggtggaaattattttcatctgattat
tcccaaattgaattgcgggttttagctcatatttcaaatgatgaacacttaaaacaagcg
ttcattaacggtgaagatattcatgctgcaacagctatgcgtgtctttgatattgctaat
cctgaagatatcgatggcaacactcgacgtcaagcaaaagctgttaacttcggagttgtt
tatggaattagcgactatggattatctcagaacctagggatttcacgtaaagaagctaaa
gcgtttattgaccgttattttgaaaaatatcctggtgtaaaaacatatatggaatcaatt
gttcgtgatgcgaaagagttaggctatgttgaaacattgtaccaccgtcgtcgttattta
ccggacatcaattcacgaaattttaatttacgctcatttgctgagagaacggcaattaac
acgcctatccaaggtagtgcggcagatattttaaagattgccatgattaaaatatctgag
agattaaaagaagaaaatatgcaggcaactatgcttttacaggttcatgatgagctagtc
tttgaagcaccagaagaagaaattgaaaaattacaacaattagttgaagaaactatggca
catgctgttgaccttcacgtcccgcttttagctgatagtagtgttggtgatacatggtat
gatgcaaaataa

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