Vagococcus penaei: BW732_01165
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Entry
BW732_01165 CDS
T04715
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vpi
Vagococcus penaei
Pathway
vpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BW732_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpi03019
]
BW732_01165
03400 DNA repair and recombination proteins [BR:
vpi03400
]
BW732_01165
Enzymes [BR:
vpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BW732_01165
Messenger RNA biogenesis [BR:
vpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BW732_01165
DNA repair and recombination proteins [BR:
vpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BW732_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
Putative_PNPOx_2
Motif
Other DBs
NCBI-ProteinID:
AQP52966
UniProt:
A0A1Q2D3M1
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All DBs
Position
complement(248167..249600)
Genome browser
AA seq
477 aa
AA seq
DB search
MVNNLEQLLYEKYGFTSFKPGQEETIKAALAGENTLAVLPTGTGKSLIYQFTSDCLAGQT
IIVSPLISLMEDQVNQLRQLGEKSVVAINSQLSFFEKNFVLSHISDYKYIFLSPETLVQE
TVIQHLKTCHISLFVVDEAHCISQWGNDFRPDYLHLYHIIQELQEPLVMGLTATATETVL
EDISKQLFKHRPYKLIQLSVDRPNIYYSVISVEDKLDYLTNFLSTHDAPGIIYFSSKKEA
EKIAAALNQVCPFQVAAYHGGMSPHDRINLQQQFINDDIRVLCATNAFGMGINKTNIRFV
IHYHLPDSLENYTQEVGRAGRDGKQSVAILLYNAGDERLHLFLQDETYHQKADLLFLKNK
TDSELEQYLPQLNDLQVKWYNQLKKNNWDWETFDAYLALKKHQQSYRLYDILQFITGQTC
RRKSLLTYFNQVDKYDIIIPCCDICQAKMPTINYHQPIKEDQGLTNSKEILKKLFLL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggtgaataacttagagcaattattatatgaaaaatatggctttaccagctttaaaccc
ggtcaggaagaaacaattaaagcggctttagctggtgagaatacgctcgcagttttacca
actggaacgggtaaatccttgatctaccaatttacaagtgattgtctagcgggacaaaca
atcattgtttcgccacttatttctctaatggaagatcaggttaatcagctacgtcaactt
ggtgaaaagtcagtcgtagcgattaatagtcaattaagtttttttgaaaaaaattttgtg
ttatcacatatttcagactataagtatatctttttaagccctgaaactttagtgcaagag
acagtaattcaacatttaaaaacttgtcatatttcgttgtttgttgtcgatgaagcacat
tgtatttcacaatgggggaatgatttccgccccgattacttgcatctttaccatattatt
caagaactacaagaaccacttgtaatgggactgacagcaacagcaaccgaaacagtttta
gaggatatctctaaacaattatttaaacatcgtccatataaacttattcaattatcagtt
gatcgtccgaacatttactattcagtgatatcagtggaggataaactagactatttaacg
aattttctatcgactcatgatgccccaggtattatctatttttcgagtaaaaaagaggct
gaaaaaattgctgctgctctaaatcaggtctgtccctttcaagtagcagcgtaccacggt
ggcatgagtccccatgaccgcattaatttacaacaacaatttattaatgacgatattcga
gtgctatgtgcaacgaacgcttttgggatgggaatcaacaaaactaatattcgttttgtg
atacattatcacttgccggatagtcttgaaaactatactcaagaggtcgggcgtgcagga
cgggatggtaaacaaagtgtggctattttactttacaatgcgggtgatgaacgactacat
ttatttttacaagatgaaacatatcatcaaaaagcagatttattatttttaaaaaataaa
acggatagtgagttagaacaatatctaccgcagttaaatgatttacaagttaaatggtac
aatcaattgaaaaaaaataattgggattgggaaacatttgatgcctatttagcattaaaa
aaacaccaacaatcgtatcgcttatatgatattttacaatttatcaccggacaaacctgt
cgaaggaaaagtttgttgacatatttcaatcaagttgataaatatgatataattattccg
tgttgtgatatatgtcaagcgaaaatgccaactattaactatcaccaacctataaaagag
gatcagggactaactaattctaaagaaatactgaaaaaactatttttgttgtaa
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