Vagococcus penaei: BW732_03305
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Entry
BW732_03305 CDS
T04715
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
vpi
Vagococcus penaei
Pathway
vpi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BW732_03305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpi03400
]
BW732_03305
DNA repair and recombination proteins [BR:
vpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BW732_03305
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BW732_03305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UvrD-helicase
AAA_30
Oxidored_nitro
AAA_7
AAA
Microtub_bd
DUF87
TEX51
Motif
Other DBs
NCBI-ProteinID:
AQP53355
UniProt:
A0A1Q2D4Z6
LinkDB
All DBs
Position
complement(689013..691007)
Genome browser
AA seq
664 aa
AA seq
DB search
MIEKDMSHPFELVSKYSPAGDQPKAIDTLVTNINNQEKEQILLGVTGSGKTFTVSNVIKE
VTKPTLVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASI
NDEIDQLRHSATSALLERNDVIVVASVSCIYGLGDPNEYQNQVVSLRIGMEMGRDQLLRA
LVDIQFDRNDIDFQRGRFRVRGDVVEIFPASRDDHALRVEFFGDEIDRIREVDALTGEIL
ADREHVAIFPATHFVTNEDHLEEAIANIQKELEERLAELRGENKLLEAQRLEQRTNYDIE
MMREMGYCSGIENYSRHMDGRQPGEAPYTLLDFFPDDFLMVVDESHVTMPQIRGMYNGDQ
ARKKMLVDYGFRLPSALDNRPLKLEEFEKHVNQIMYVSATPGPYEMERTDKVVEQIIRPT
GLLDPTVEVRPIMGQIDDLVGEINARVDRNERVFITTLTKKMSEDLTDYLKELGMKVKYL
HSDIKTLERTEIIRELRLGTFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRSERSLV
QTIGRAARNSNGKVIMYADKMTDSMARAIDETKRRRMIQEDYNTAHGIEPKTIIKEVRDL
IRAVKVAEEDETYDLTQTYREMSREEKEATLFSMEQEMKQAAKELDFEKAATLRDAILEL
KSGK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaaagatatgagtcatccctttgaactagtatctaagtattcgccagcggga
gaccaacctaaagcaattgatactttagttacaaatataaataatcaagaaaaagagcag
attttactaggtgttacgggttctggtaagacatttacggtctcaaatgtgattaaagag
gtcacaaaaccaactttggttattgctcataataagacacttgctggtcaattgtatagt
gaatttaaagagtttttcccaaataatgcagtagagtattttgttagttattacgattac
tatcaaccagaggcatatgtgccatcgagtgacacatatatcgagaaagatgccagtatt
aatgatgaaattgatcaactgcgacattcagcgacgagtgccttgctagaacgaaatgat
gtcattgttgtggcatctgtctcatgtatttatggattaggggatcctaatgagtaccaa
aaccaagtggtttctttacgaattggcatggaaatgggacgtgatcaattattgagagct
ttagttgatattcaatttgatcgtaatgatatcgattttcagcgtgggcgttttcgcgtg
cgtggtgatgttgtcgaaatttttccagcatcacgtgatgaccatgcactacgtgtcgaa
ttttttggtgatgaaatagatcgaattcgtgaagttgacgcattaacgggcgaaatttta
gctgatcgtgagcatgtggcgattttcccagcgactcactttgtgactaatgaagaccat
ttggaagaagcaattgccaatattcaaaaggaacttgaagaacgattagcagaacttcga
ggtgaaaataagttattagaagcacaacgtttagaacaacgaaccaattatgacatcgaa
atgatgcgtgaaatgggctactgttcggggattgaaaactactcacgtcatatggacggt
cgccaaccaggcgaagctccatatactttacttgatttctttccagatgattttttaatg
gttgttgatgaatcacatgtgactatgccacaaattcgcgggatgtataatggtgaccag
gcacggaaaaaaatgttagtggactatggtttccgtttaccaagtgctctagataatcgt
ccgctaaaattggaagagtttgaaaaacatgtcaaccaaatcatgtacgtttcagcgaca
ccaggaccctatgaaatggagcgaacggataaagtggttgaacaaattattcgtccgaca
ggcttactagatccaacagttgaagtgcgtccgattatgggacaaattgatgatttggtt
ggtgaaattaatgcacgtgttgaccgaaatgaacgagtgtttattacgacattaaccaag
aaaatgtctgaagatttaacagattacttgaaagaattaggcatgaaagttaaatatctg
cacagtgatattaagacacttgagcgaacagaaatcatccgtgagctacgcttaggaaca
tttgatgtgttaatagggattaacttattacgtgaaggaatcgatgtaccagaagtatcg
ctagtagcgattttagatgctgataaagaagggttcttaaggagtgaacgctcattagtc
caaacaattgggcgagctgctcgaaattctaacggaaaagttatcatgtatgccgataaa
atgaccgattctatggcccgagcaattgatgaaactaaacgtcgacgaatgattcaagaa
gattataatacagcacatggtattgaaccaaaaacgattattaaagaagtccgtgacttg
attcgtgctgtgaaggtagctgaggaagacgaaacctatgatttaacacaaacatatcgt
gagatgtcacgtgaagaaaaagaagcaaccttgttctctatggagcaagaaatgaaacaa
gctgcaaaagaattagattttgagaaagccgccactttacgtgatgcgattcttgaattg
aaatctggaaagtag
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