KEGG   Vagococcus penaei: BW732_04875
Entry
BW732_04875       CDS       T04715                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vpi  Vagococcus penaei
Pathway
vpi03030  DNA replication
vpi03430  Mismatch repair
vpi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BW732_04875
   03430 Mismatch repair
    BW732_04875
   03440 Homologous recombination
    BW732_04875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpi03032]
    BW732_04875
   03400 DNA repair and recombination proteins [BR:vpi03400]
    BW732_04875
Enzymes [BR:vpi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BW732_04875
DNA replication proteins [BR:vpi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BW732_04875
DNA repair and recombination proteins [BR:vpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BW732_04875
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AQP53633
UniProt: A0A1Q2D5K2
LinkDB
Position
complement(1031178..1031711)
AA seq 177 aa
MNFIAMDFETANHEAHSACSLALVMVKHNRIVGEYYTLINPQTDFHWRNIQVHGIEAKDV
SAAPTFADIWPDIQHYFEPNHLVVAHNAAFDNRVLLNCLDKYQLAPAHFLSLCTVRTSRK
LYPKLANHKLNTVCDYLDIPLENHHHALDDSLACASILLAQEKTYGVEPLKKLVKKI
NT seq 534 nt   +upstreamnt  +downstreamnt
gtgaattttattgcaatggattttgaaacggcgaatcatgaggcacatagtgcttgctca
ttagctttagtgatggtcaaacataatcgtattgtgggtgaatattatacattaattaat
ccacaaacggactttcattggcgcaatattcaagttcatggtattgaggcaaaagacgtt
agtgctgccccaacatttgccgacatttggccggatattcagcactattttgagccaaat
catttagtggtagcacataatgctgcgtttgataatcgggttttactaaactgtttagac
aagtatcaactagcacccgctcatttcttatcgctttgtacagtgcgaacgagtcgaaaa
ttgtatccgaagttagctaatcacaagttaaacacggtctgtgattatttagatattcca
cttgaaaatcatcaccatgcattagatgatagtttagcgtgtgcatcaattttactggca
caagagaaaacatatggtgttgaaccattaaaaaaattggtcaaaaaaatataa

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