Vagococcus penaei: BW732_05410
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Entry
BW732_05410 CDS
T04715
Name
(GenBank) ATP-dependent DNA helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vpi
Vagococcus penaei
Pathway
vpi03420
Nucleotide excision repair
vpi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BW732_05410
03430 Mismatch repair
BW732_05410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpi03400
]
BW732_05410
Enzymes [BR:
vpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BW732_05410
DNA repair and recombination proteins [BR:
vpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BW732_05410
MMR (mismatch excision repair)
Other MMR factors
BW732_05410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
AAA_16
AAA_30
AAA_11
SLFN-g3_helicase
PhoH
FtsK_SpoIIIE
DEAD
ResIII
NACHT
FlgN
Motif
Other DBs
NCBI-ProteinID:
AQP53728
UniProt:
A0A1Q2D5S3
LinkDB
All DBs
Position
complement(1148040..1150199)
Genome browser
AA seq
719 aa
AA seq
DB search
MSQPEYQLEVNYLEDVYNQLLARKEQLEQLLATVRTEGISDLQKMMGDVRINFSNITDNL
DTFAALEMKNREIDQLNIKLKSAEEFLTKVDRLLAAPYFGKITVDFLDDEPEEPFYIGIN
GFANDAGDYLVYDWRSPIAELFYNNEMGSSFYTVNKNRIDVAITQRRQFIVEANHLLNYF
DTAISIQDDVLLDALGSNATRHMRDITSTIQKEQNVIIRDTTHPNILVNGVAGSGKTSTI
MQRIAYLLFQYREYLTSDNLMILSPNNKFIDYIANVLPSLGEKNPLNLTLLQFVKQHFNL
QLVDEAMHFERVSAQSITPETQVLREKDFVTFVTKSGHLFSQDEQMFQGLMRKNQEIISK
QHIWELFQSTPKESSLIDRLQATKQLLRRSWEERLTKQARSNKVQDQVLSLSEELQEKIF
GSLLTEKAEKNVYPYAKKLLKRQYRAITKGIEQNDWLDLDYLFQKIYTTYTGSAYEWSSD
EAYNVDEAVVFLTLQHHLVERLDVSAMRFIFIDEVQDYTPAQMSLLLDLFPNAKFTMVGD
ENQSIFNASIPFAAIEADFAQRQRSCHPYNLLSSYRSTGAITAFFGHLSTIDHSMSIVPI
REEGEKPSYLAYQTSEDFCRLVQDVLVTLQDEPLTIITKDASEARRVKEWLVPDVLSRVK
IYPITLCKGLEFDNVFIYHVSKGHYMNQRDQKLLYTIASRAMKRLFISYENQLSPLINM
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaccagagtatcaattagaagtaaattatttagaagatgtctacaatcaactt
ctagcacgtaaagagcaactcgaacaattattagcgactgttcggacagaaggaatcagt
gatttacagaaaatgatgggtgatgtgcggattaatttttctaacatcacagataatctc
gatacgtttgcggcactagagatgaagaaccgcgaaattgatcaattaaatattaagtta
aaatcggccgaagaatttttaactaaggtggaccgcttattagccgccccttatttcggg
aaaattacggttgattttttagatgatgaaccagaagaacctttttatattggtattaat
ggatttgcgaacgatgccggggattatctagtttatgactggcgatcacccattgcagaa
ttattctataataatgagatgggatcttccttttatacggtgaataaaaatcggattgat
gtggcgattacacaacgtcgacaatttattgtagaggccaaccatttattaaattatttt
gatactgctatttccattcaagatgatgttctattagatgcactgggtagtaatgcaaca
cgccacatgcgtgatattacttccactattcaaaaagagcagaatgtcatcattcgagat
acgacacatccaaatattttagtcaatggggtagctggtagtggtaagacgtcaacgatt
atgcagcggattgcctacttactcttccaataccgtgagtatttaacatcagataatctg
atgattttgtccccaaataataaatttattgattacattgcaaatgtcttaccttcttta
ggtgagaaaaatccgttaaatttgacgttgttacaatttgtgaagcaacattttaatcta
caattagttgatgaagcgatgcattttgaacgggtgagtgctcagtctattactccggaa
acacaggtcttgcgtgagaaagattttgttacatttgtgacaaaatcgggacatttattt
agtcaagatgagcagatgtttcagggtttaatgcgtaagaatcaagagattatttccaag
caacacatttgggaattattccaatcaacacccaaagaatcaagcttgattgatcgccta
caagcgaccaaacaattattacgtcgctcatgggaagagcgtctaacgaaacaagcccgc
tctaataaagtacaagaccaagtgttatcgctatctgaggagttacaggaaaagattttt
ggtagtctcttaactgagaaagctgaaaaaaatgtatacccttatgctaaaaaattacta
aaacgccaatatcgagccattacaaaaggtattgaacagaatgattggctagaccttgat
tatttgttccaaaaaatctatacgacttataccggctcagcctacgagtggagcagtgat
gaggcctataacgttgacgaagcagtggtctttttaacgttgcaacatcatttagtcgag
cgattagatgtttcagctatgcggtttatttttattgatgaggtgcaagattatacacca
gctcaaatgagtttattgctagatttatttcctaatgccaagtttactatggtaggtgat
gagaatcagtcgattttcaatgcgtcgattccttttgctgcgattgaagcagacttcgcg
caacgccagcgctcttgtcatccttataatttgttaagtagctatcggtcaacaggtgct
attacggcattttttggtcacttatcaacgattgatcacagtatgtcgattgtaccaatt
cgtgaagaaggggaaaaaccaagttatcttgcatatcaaacatcggaagatttttgtcgt
ttggttcaagatgtactggtaacactacaagatgaaccgttgacgattattacaaaagat
gcttctgaagcgagacgcgtgaaagaatggttggtacctgatgtcttgtcacgagtaaaa
atctacccgattacgttatgtaaagggttagagtttgataatgtctttatttaccatgta
tctaagggacattatatgaaccaacgtgaccaaaaattattgtacacaatagcatcacga
gcgatgaaacgtctatttattagttacgaaaatcagttaagtccgttaataaatatgtaa
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