Vagococcus penaei: BW732_07750
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Entry
BW732_07750 CDS
T04715
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vpi
Vagococcus penaei
Pathway
vpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BW732_07750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpi03019
]
BW732_07750
03016 Transfer RNA biogenesis [BR:
vpi03016
]
BW732_07750
Enzymes [BR:
vpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BW732_07750
Messenger RNA biogenesis [BR:
vpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BW732_07750
Transfer RNA biogenesis [BR:
vpi03016
]
Prokaryotic type
tRNA degradation factors
BW732_07750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
KH_2
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AQP54806
UniProt:
A0A1Q2D8U1
LinkDB
All DBs
Position
1603411..1605549
Genome browser
AA seq
712 aa
AA seq
DB search
MSEKKVFETIWGGRPLSVEIGQLAKQANGAVLVRYGDTVVLTAAVASKQAKDVDFFPLTV
NYEEKMYAVGKVPGGFIKREGRPSESATLTARLIDRPIRPMFAEGFRNEVQITNTVMSVE
QDCQPEMAAMLGSSLALCVSDIPFNGPIAGVEVGRVNGEYVINPTIEQKEVSDIDLSVAG
TKDAINMVESGAKEVSEEDMLGALLFGHAEIKRLVAFQEKIAQEIGKEKMTIELLQIDAD
LNAEINDIYKNRMTQAIQTEEKLAREDNIDALKAEISEAYAEKFAEEPEAAKLMKEVYQI
LEDMEKSEVRRLITVEKVRPDGRKVDEIRPLASEVGLLPRVHGSGLFTRGQTQALSACTL
APLGEHQIIDGLGVEDSKRFIHHYNFPQYSVGSTGFMRAPGRREIGHGALGERALAQVIP
SESDFPYTIRLVAEVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLVMDGDNYT
ILTDIQGMEDHLGDMDFKVAGTKDGITALQMDIKIEGITEAILTEALSQAKKARMELLAE
LTATIAAPREELSPYAPKIEMIKIKPEKIKNVIGKGGETINKIIEETDVKIDIDQEGNVS
IAHSDSAKIKRAIEIIEELVRDVEVGQTYNAKVVRIEKFGAFVNLFKGKDALVHISQLAH
ERVNKVEDVLKMDDEILVKVTEIDKQGRVNASRKVLLEKPEEKKEEPETTDK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atatcagaaaaaaaagtctttgaaacaatttggggtggccgcccactatctgttgagata
ggtcaattagccaaacaagcaaatggcgcggtactagtgcgctatggagatactgttgtt
ttgacagcggctgtagcttccaaacaagccaaagacgttgatttcttcccgctaacagtt
aactatgaagagaaaatgtatgctgttggaaaagttcctggaggctttattaaacgtgaa
ggtcgtccaagtgaaagtgcgacgttaacagcgcgattaatcgaccgcccaatacgtcca
atgtttgcagaaggcttccgtaatgaagttcaaattactaatacagtaatgagtgtggaa
caagattgtcagcctgaaatggcagcgatgttaggatcttctctagctttgtgcgtttct
gatattccatttaatggtccaattgctggtgttgaagttggtcgtgttaatggtgaatac
gtgattaatccaacgattgagcaaaaagaagtttctgatattgatttgagtgtcgctgga
accaaagatgctattaatatggtagagagtggcgctaaagaagtatctgaagaagatatg
ttaggagctttactatttggtcatgcagaaatcaaacgattagttgctttccaagaaaaa
attgcacaagaaattggcaaagagaaaatgacgattgaattgctacaaattgatgctgat
ttaaatgcggaaattaatgacatctataaaaatcgtatgacacaagcaattcaaactgaa
gaaaaattagctcgtgaagataatattgacgctttaaaagctgagattagcgaagcttac
gctgaaaaatttgcagaagaaccagaagctgctaaattaatgaaagaagtttatcaaatt
ttagaagacatggaaaaaagtgaagttcgtcgcttaattactgtggaaaaagttcgtcct
gatggtcgtaaagttgatgaaattcgtcctctagcttctgaagttggcttattaccacga
gtgcacggttcaggattgtttacacgtggacaaacacaagcactatctgcttgtacacta
gcgcctttaggtgagcatcaaattattgatggtttaggtgtcgaagacagcaaacgattt
attcaccactataattttccacaatatagtgtaggctcaacaggatttatgcgtgctcct
ggccgtcgtgaaattggacatggagctctaggtgaacgtgctttggcgcaagttattcct
agtgaatcagactttccatatactatccgattagtggctgaagttttagaatcaaatggt
tcatcatcacaagcaagtatctgtgctggaaccttggctctaatggatgctggtgtgcca
ataaaagcacctgtagctggtattgctatgggattagtgatggacggagataattacaca
atcctaactgatattcaaggtatggaagaccatttaggcgatatggactttaaagtagct
ggaacaaaagatggtattacagccttacagatggatatcaaaattgaaggaatcactgaa
gctatcttaacggaagctttatcacaagcgaaaaaagcacggatggaattattagctgag
ttaacagctactattgcggcgcctcgtgaagagctaagcccttatgcacctaagattgaa
atgattaagattaaacctgaaaaaatcaaaaacgttattggtaaaggtggcgaaaccatc
aacaaaattatcgaagaaactgacgttaagattgatatcgatcaagaaggtaatgttagt
atcgctcattcagatagtgcaaaaattaagcgtgccattgaaattattgaagagcttgtc
cgcgatgttgaagtcggacaaacatataatgccaaagttgttcgcatcgaaaaatttgga
gcatttgttaatcttttcaaaggcaaagatgcattagtacatatttctcaattagcgcat
gaacgtgtgaataaagttgaagatgtacttaagatggatgatgaaattttggttaaggta
actgagattgataaacaaggtcgtgtgaatgcatcgcgtaaagtattattagaaaaacca
gaagagaaaaaagaagagccagaaacaactgataaataa
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