Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_00355
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Entry
M636_00355 CDS
T02760
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpk03400
]
M636_00355
Enzymes [BR:
vpk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
M636_00355
DNA repair and recombination proteins [BR:
vpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
M636_00355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AGQ95912
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Position
II:73013..74557
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AA seq
514 aa
AA seq
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MRYDTVRLILGDQLNCEHSWFQQADDTVLYLIAELKQENTYVTHHIQKVCAFFSAMAIFA
QEKQEEGHHVLHLTLDDTAAFDDLDQVLQHYVREVGASKFEYQRPDEYRLLEQLTKLKLE
GVVKRCVDTEHFLLPFAEIEQQFPQGKHVMMEHFYRRMRKRFDILMQDGKPVGEKWNYDA
NNRNKLKAKDIEQLPKPLMFSLNVDEIVERLTRHKISTIGSLNGDLLWPVNRAQSLSLLA
HFCQVCLPHFGRFQDAMTAEHEYKWSLYHSRLSFSMNSKLLHPKEVIDAALSAYQSNKHI
DIAQVEGFIRQILGWREFIRGVYWANMPQYPQKNELEASRDLPDYFWTGKTKMACMRNAI
GQSLDYAYAHHIQRLMVTGNFCLLTEMNPDQVDAWYLGIYVDAIEWVEMPNTRGMALFAD
GGIVGTKPYAASGSYINKMSDYCKGCHYDNKARSGEGSCPFNSLYWRFMDKHEKRLATNP
RIGMIFRSWDNMEASQRQAILETAERYIADLEHL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatgacacggtgcgattgattctcggcgaccaactcaactgcgagcattcttgg
tttcagcaagcggatgataccgtgctttacttgattgctgagctcaagcaagaaaacact
tacgttacgcatcacattcaaaaggtgtgcgccttcttctccgcgatggctatttttgct
caagagaagcaagaagaagggcatcatgttctgcatctaacgttggatgacactgccgct
tttgacgatcttgaccaagtattgcagcactacgttcgtgaagtaggggcaagcaaattt
gagtatcaacggcctgatgaatatcgactgttggaacaactgaccaagttgaaattagaa
ggtgttgtcaaacgttgtgtcgacactgagcattttttactgccttttgcagaaatagaa
cagcagttcccgcaaggcaaacacgtcatgatggagcacttttaccgacggatgcgcaag
cgctttgatattttgatgcaagacggtaagccagtgggtgaaaagtggaattacgatgcc
aacaaccgtaataagcttaaagcgaaagatatcgagcaattacccaaaccgctgatgttt
agcctgaatgttgacgagattgttgagcgactaacgcgacacaagatctcgaccatcggt
tcactaaatggtgatttgttatggccagtgaatcgcgctcaaagcctatctttgctcgcg
catttttgtcaggtttgtctccctcattttggtcggtttcaagatgcgatgacggcggag
cacgaatacaaatggagtttgtatcacagtcgtttgtcgttctcgatgaacagtaagtta
ctgcaccccaaagaggtaatcgatgctgcacttagtgcgtatcaatcaaacaaacacatc
gatattgcacaggtagaaggattcattcgtcagatcttaggttggcgggaattcattcgg
ggtgtgtactgggcgaatatgccgcagtatccgcagaaaaatgagctcgaagcatcacgt
gatttacccgactacttttggacaggaaaaaccaagatggcttgtatgcgcaatgcaata
ggccagtctctcgattatgcctacgcccatcatattcagcgtttgatggtgacgggcaac
ttttgtttgctcaccgagatgaatcctgaccaagtagatgcttggtatctcggcatttat
gtcgatgcgattgagtgggtagaaatgcccaatacacgcggtatggcattgttcgccgat
ggtggcattgttggcactaagccttatgccgcaagcgggtcgtacatcaacaaaatgagc
gattactgtaaaggttgccactatgacaacaaggcacgcagtggtgaaggctcttgtccg
tttaatagtctttattggcgattcatggacaagcatgaaaagcgactcgctaccaatcca
cgcatcggcatgattttccggtcttgggacaatatggaagcttcgcagcgccaagcgatt
cttgagacggctgaacgctatatcgcggatttggagcatttgtga
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