Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_01655
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Entry
M636_01655 CDS
T02760
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00630
Glyoxylate and dicarboxylate metabolism
vpk00680
Methane metabolism
vpk01100
Metabolic pathways
vpk01120
Microbial metabolism in diverse environments
vpk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
M636_01655
09102 Energy metabolism
00680 Methane metabolism
M636_01655
Enzymes [BR:
vpk01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
M636_01655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
NAD_binding_8
Fer4
Fer4_7
Fer4_9
Fer4_6
DAO
FAD_oxidored
FAD_binding_2
Fer4_2
NAD_binding_7
Thi4
Fer4_8
HI0933_like
Fer4_16
Fer4_10
FAD_binding_3
Fer4_21
Fer4_18
Fer4_15
Amino_oxidase
Fer4_22
Fer4_4
AlaDh_PNT_C
Fer4_3
Fer4_Nqo3
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
AGQ96141
LinkDB
All DBs
Position
II:345374..349642
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AA seq
1422 aa
AA seq
DB search
MIEIVIDGKYRIVEEGLTLLEAAKVCGVEIPSLCGMNKSNEKIPCDLCVVEVESGGTKRA
CDLKVYRGLNVVTQSEQLSEHRRKALNRIMTDHYADCEAPCKTACPAGVDIQSYLYHISQ
NDHQKAIEVIKRTLPMPLSIGRVCPAFCESECRRSLVDEPIAIRQLKRHAADADLAAHEA
YVPEKKPAKHRKIAVVGSGPGGLTAGYYLSNEGYDVTVFESMPKAGGWLRYGIPEYRLPK
DILDKEIELMCRNGMQVETNKKLGVDFTLSQLSEDYDAVCLAVGASQAVEMNYSGSDLDG
CYLGVDYLKDYVTEQNYVTGRKVAVIGGGNTAIDCARTARRAGADTTLIYRRTRDEMPAE
DYEIVEAEHEGVKFHFLTNPAENIADENGRVKAIRLERMALGEPDASGRRSPKPTGEFFT
EAFDTVIAAVSQKPDLSFLENDDLSIPLTRWNTSESDSQTMHTGTGNIFSIGDFRRGPAT
AVEAVGDGRVAAKAIDLFLNGDMADMPKPAFNSRKEKKLAQVDPLHFENIQKVARSIMPE
LTPAQREQSFAEVELGFDNEEAMKEAARCLECGCQANTDCALRDYSTEYHAEQHFDVSVD
VSSASVIGHQDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACREQAVHGVLS
FVSDKNGRPALRPDDRPRFRSDEKGASCSCLTLMGDSKCVQCGACVQACPTGAMVDSRDR
SQGRTEQLKAVDTICTYCGVGCKLTMFVDEQQNKIRYVKGADSPVNQGMLCVKGRFGFDF
ISSEERLTTPLIRKDGWLQPASWDEAIQLVASKLSTIKQDFGSNALAGFSSAKTTNEDNY
AFQKFIRRELGTNNVDHCARLCHASSVTGLEASLGSGAMTNDIPSIKHSDVIFIIGSDTT
SAHPIIASHIKQAIRHHGARLIVADPKRVDMAEHAELYLAHRPGTDVMLLNGVMQQIIKN
GWYDQEYIEERVDGFDTLLQEVMSPAYNLDKVELVTGVKADDIFAMARMIGTAKRTAVYY
SMGITQHTTGHDNVRSIANLQLLCGNIGIEGGGINPLRGQSNVQGACDMGALPNCYPGYQ
KVYNPIVRQKFAIEWDAPNLPSEQGLTLTEIIDAACKREVRGMYIMGENPVLSDPNQAHV
IEGLEALDFLVVQDIFLTETAQYADVVLPSCSFAEKSGHFTNTERRVQRVNAAVKAPGEA
KEDWWIIQAIANAMGSDWHYQCVSEITSEIARVTPQYAGLRWDAITPNGVQWPSNKNNPN
GTRIMHQTQFTRGKGQMVGVPFRYAAELPDEEYPLVLTTGRVLEQFHTGTMTRKTKGLDN
LAGPRAMISVEDAEAIGIHNGQRLKVSTRRGNIEIDAFVTKRMQKGVVFIPFHFVESPVN
RLTTTATDPHAKIPEFKVAAVKIEISETAGQPEPVEEVVHHV
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgtcatcgatggaaaatatagaattgtagaagaggggctaacccttctg
gaagcagccaaagtgtgtggggtcgaaatcccttcactgtgcggaatgaacaaaagtaac
gagaaaattccgtgtgatttgtgtgttgtcgaagtggaaagtggcggaactaagcgtgcc
tgtgatctcaaagtgtaccgcggtctcaatgtcgtcacacaatcagaacaactgagcgag
caccgcagaaaagcgctcaaccgaatcatgacggaccactacgccgactgtgaagctcca
tgcaaaacggcgtgtcctgctggggtagacatccaatcttacctctaccatatctcgcaa
aacgatcatcaaaaagcgattgaagttattaaacgcacactgccaatgccgttgtctatt
gggcgcgtgtgtccggcattctgcgaaagtgagtgtcgccgttctttggtggatgagccg
attgccattcgccaactcaaacgccatgccgcagatgcagatctagcggcgcatgaagcg
tacgtcccagagaaaaaaccagcgaagcatcgcaagatcgccgttgttggtagtggcccc
ggtggcttaacggcaggttattacttgtcgaatgaaggttatgacgtcaccgtatttgag
tccatgccaaaagcaggtggttggctacgctacggcattcctgaatatcgcctacccaaa
gacattctagacaaagaaatcgaactgatgtgccgcaacggcatgcaagttgaaaccaac
aaaaagcttggtgttgatttcacgctgtctcaattgagtgaagactacgatgctgtctgt
ttggcagtgggggcgtctcaagcggtagaaatgaattattctggtagcgacttggacggt
tgttatctcggtgttgattacctgaaagattacgttacagaacaaaactacgttacgggc
agaaaagttgccgtgattggtggtggtaacactgcgatcgactgtgcgcgtacggcgcgt
cgtgcgggtgccgataccactttgatctatcgtcgaactcgcgacgaaatgccagccgaa
gactacgaaatcgtcgaagctgaacatgagggcgtgaagttccatttcttgacgaatccg
gcggaaaacatcgcggatgaaaacggccgggtgaaggcaattcgattagagcgaatggcg
ttaggtgagccagatgcgtctggtcgtcgtagcccgaaaccaacgggtgagttctttact
gaagcatttgataccgtgattgcagcggtatcgcaaaagccggatctcagcttcttagaa
aacgatgatttgtctattccactaacgcgttggaacacatctgagtccgactcgcaaacc
atgcacacgggtacgggcaatatcttcagtatcggtgattttcgtcgtggtcctgcgaca
gcggttgaagcggtgggggatgggcgagttgcggcaaaagcgattgatctgttcctcaat
ggcgatatggcggatatgccgaaacctgcgttcaactctcgtaaagagaaaaaactggcg
caggttgacccacttcattttgaaaacatccaaaaagttgctcgttcaatcatgccagag
ttgactccagcgcagcgtgagcagagttttgctgaagtggaactgggctttgataacgaa
gaggccatgaaagaagcggcgcgctgcttagagtgtggttgccaagcgaataccgactgt
gccttgcgagattactcaacggaatatcatgccgagcaacatttcgatgtttccgtggac
gtttcctctgctagcgtgattggtcatcaagattggctcgatttacgtgcgaaagatctt
cgtcataaatacgaagtagaccgcagttctgagttcattgaatttgatgctaaccgctgc
attagttgtggtcagtgtattcaagcatgccgtgagcaagcggtacatggtgtgttgagt
tttgtgtcggataaaaatggccgaccagctttacgaccagatgatcgtccacgattccgc
tccgatgaaaaaggcgcaagttgcagctgtttgacgctcatgggcgattcaaaatgcgtg
caatgtggtgcgtgtgttcaggcatgtccaacgggcgcgatggtggacagtcgtgaccgc
tctcaaggcagaaccgaacagctaaaagccgtcgataccatttgtacctactgcggtgtg
ggttgtaagttgaccatgtttgttgatgagcaacagaacaaaatccgctatgtaaaaggg
gcggattcgccagttaaccaaggcatgctgtgtgtgaaaggccgttttggttttgatttc
attagcagcgaagagcgtttaaccacaccactgattcgcaaagatggttggttgcagcca
gcaagttgggacgaagcgattcagctagtggcttcgaagctttcgaccatcaagcaagat
tttggtagcaacgcactggccggattctcttcagcgaaaaccactaacgaagataactac
gcgtttcaaaaattcatccgtcgtgaacttggtacgaacaacgttgatcactgcgcacgt
ttgtgtcacgcatcaagtgtgacagggcttgaagcatcgttggggagtggtgcgatgacc
aacgacattccaagcattaagcattccgatgtgatctttattatcggttctgacaccaca
tctgcgcacccgatcatcgcttcgcacatcaaacaagcgattcgtcatcacggggcgcgc
ttgattgtggcagacccgaaacgagtagacatggccgaacatgcagagctgtacttggcg
catcgtccgggtacggatgttatgttgctcaatggcgtgatgcagcaaatcatcaaaaat
ggttggtacgatcaagaatacatcgaagagcgcgtcgacggctttgataccttgcttcaa
gaggtaatgtcgccagcgtacaatctcgacaaagttgagttagtgacgggcgtaaaagcg
gacgatattttcgcgatggcgcgaatgattggtacggcaaaacgcacggcggtgtattac
tcaatgggtattacccagcatacaacagggcacgacaacgttcgttcgattgcaaacctg
caattgttgtgtggcaacatcggtattgagggtggtggtattaacccactgcgcggtcaa
tcaaacgtgcaaggtgcgtgtgatatgggcgcattgccgaactgctatccgggataccaa
aaagtgtataacccgattgttcgtcagaaattcgcgattgagtgggatgcgccgaactta
ccttctgagcaagggcttaccctaacggaaatcatcgatgcggcgtgcaaacgagaagtt
cgcgggatgtacatcatgggcgaaaacccagtactgagtgatccaaaccaagcacacgtg
attgaagggttggaagcactcgacttcttggtcgtgcaagacatcttcctcaccgagacg
gcgcagtacgccgatgtggtattgccttcttgttcatttgcggaaaaatccggtcacttc
accaatactgagcgacgcgtgcagcgcgttaatgcggcagtgaaagcgccgggtgaggcg
aaagaagattggtggatcattcaagcgatcgcaaacgcgatgggcagcgattggcattac
cagtgcgtttctgaaatcactagcgagatcgcgcgtgtaacgccgcaatatgcagggttg
cgttgggacgcgatcacgccgaacggtgttcaatggccaagtaacaagaacaatccaaac
ggtactcgtattatgcaccaaacccaatttacccgagggaaagggcaaatggtgggcgtg
ccgttccgttatgcagccgagttgcctgatgaagagtatcctttggtgcttacaacaggg
cgtgtgctagaacagttccacaccggtacgatgacgcgcaaaacgaaagggttggataac
cttgctgggccaagagcgatgatcagtgttgaagatgctgaagccattggtatccataat
ggtcagcgcctaaaagtctcaactcgtcgtggcaacatcgaaattgatgcgtttgtgacc
aagcgaatgcaaaaaggcgtcgtgtttattcctttccatttcgttgagtcgccagtcaac
cgcttgacgactacggcaacggacccgcatgcgaaaattcctgaattcaaagtcgcggcg
gtgaagattgaaatcagtgaaacggccggtcaaccagagcctgtcgaggaggtggtacac
cacgtctaa
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