KEGG   Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_02550
Entry
M636_02550        CDS       T02760                                 
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:vpk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpk03400]
    M636_02550
Enzymes [BR:vpk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     M636_02550
DNA repair and recombination proteins [BR:vpk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    M636_02550
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_12 AAA_30 Viral_helicase1 CdvA Death_3 GH97_N ResIII
Other DBs
NCBI-ProteinID: AGQ96291
LinkDB
Position
II:548364..550433
AA seq 689 aa
MQLTATSKAQFFIQNEYYHVEIKENSVLLSSIGSEEHIPFTVWNGKVNVKRGLFWSSLQF
FAHEQDGKQQSWLVQGLPWPQCRKFALEAVRKYQEWHNTQCRKLAEYLPKWEEELYQLKH
LPAYLSHSQVMAWVEKLNQELAEIKTSLDEAKMRMPNRMGEIEPWLVDTSHTLGERNHEW
LENERPNWEVLFNRIESSPLNLSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVAYLLQSH
QAQAEELLMLAFGRDAAKEMKERLVDKVGLAAEGVRVNTFHQLGLYILNQVEQQPVEISP
LALDDNQRTAWCVDWLKKHWMTPTNFKRWQKHLDKWPIAYLKGDDELGSHSENPKLIAWL
DSQLSHLAAVGLTKKQVQEKLVDHQDYTRLNSELALCWPCFSAWQKMLKESNQVDFPTMI
SRATDYVNKGKFVSPWRFVMVDEYQDISPDRLALIEALCESTEKQPGATLFAVGDDWQAI
YQFAGADVDLITGFKERFAHSTVHHLDTTYRFNNQIGDVANTFVQQNPSQLPKTLNSHKQ
RKQKSVHTAPSNQVEKILDQLNQQAKQTKSVLLLGRNHYHKPDLYDDWLRRFPNLDIRFM
TCHASKGREADFVIILAVDEGQFPAKKKQIHIDGALTESKDKFPYAEERRLFYVAITRAK
EKVWITHTGAGSAFVQELVSGDYPIVTSR
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgcagcttactgccaccagcaaagcacagttttttattcaaaatgagtattatcatgtc
gaaataaaagagaacagtgttttattaagctcaattggcagtgaagagcatattcctttc
accgtctggaacggtaaagtcaacgtgaaacgcggcctgttttggagctcgcttcagttc
ttcgctcacgagcaagatggcaagcaacaaagttggttagtacaaggtttaccttggcct
caatgtcgtaagtttgcgttagaagctgtgcgtaagtatcaagagtggcacaacactcag
tgccgaaaactggcggagtaccttcctaaatgggaagaagagttgtaccagctcaaacac
cttcctgcctatctttctcattctcaagttatggcgtgggtagagaaactcaatcaagaa
ctagcagaaatcaagaccagcctagacgaagctaaaatgcgcatgcctaatcgcatgggt
gaaattgagccttggttggttgacacctctcatacgctgggagagcgcaatcacgaatgg
ctggagaacgaacgtcctaattgggaagtcttgttcaaccgcattgaatcgtctccgctg
aacttgtcgcaacaatacgcagtgttgctcaatgatgatcacaaccttgttttggctggg
gcaggctcgggtaaaaccagcgtattgactgcaagagtggcttacttacttcaaagccat
caagctcaagcggaagaacttttgatgcttgcgtttggccgagatgccgcgaaagaaatg
aaagagcgtttggttgataaagtcggcttggcggcagaaggcgtaagagtcaataccttt
catcaactcggcttgtacattcttaatcaagtcgagcagcagcctgtcgaaattagccct
cttgcattagacgataaccaacgcacggcttggtgtgtcgactggttgaaaaagcactgg
atgacaccaacaaatttcaaacgttggcaaaagcatttagataaatggcctattgcttac
ctgaaaggtgatgatgagctgggtagccattcggaaaatccgaagctgattgcttggttg
gattctcaattgtcgcatttagctgctgttggtttaacgaaaaagcaagtgcaagagaag
ttggtggatcaccaagactatacgcgcctcaatagcgaattagcactgtgttggccgtgc
ttttctgcatggcaaaaaatgctcaaagagagcaatcaagtcgatttcccaaccatgata
agtcgagcaacggattacgtgaataaagggaagttcgtatcgccttggcgttttgttatg
gtcgatgagtatcaagatatctctccagatcgtttggcgttgatcgaagcgttatgtgaa
tcaacagagaagcagcctggcgcaaccttgtttgccgtaggcgatgactggcaagcgatt
taccagtttgcgggcgcagatgtggacttgattactgggtttaaagagcgattcgctcac
tctacggtacatcacctagacacaacctatcgtttcaataatcaaattggcgatgtagcg
aatacgttcgtgcagcaaaacccatcacaattaccgaagacactcaacagccacaaacaa
cgcaagcaaaagagcgtgcacacagcgccaagcaaccaagttgagaaaatcctcgatcaa
ttgaatcaacaagcgaaacaaactaagtctgtattgctgcttggccgtaaccattaccac
aaacccgatttgtatgatgactggttaagacgattcccgaatctagatattcgttttatg
acttgtcatgcgagtaaaggtcgagaagccgattttgtgattattttggctgtggatgaa
gggcagttcccagctaagaagaagcagattcacatcgacggtgcgttgaccgagtccaaa
gacaaattcccgtatgccgaagagcgccgactgttctatgtcgcgattacgcgtgcaaaa
gagaaagtgtggatcacgcatacgggggcaggttctgcatttgtgcaagaactcgtaagt
ggcgactacccaatcgttacctcacgctaa

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