Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_04505
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Entry
M636_04505 CDS
T02760
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpk03400
]
M636_04505
DNA repair and recombination proteins [BR:
vpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M636_04505
Archaeal homologous recombinant proteins
M636_04505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGQ96573
LinkDB
All DBs
Position
II:complement(988764..991820)
Genome browser
AA seq
1018 aa
AA seq
DB search
MKPIKLTMQAFGPFAKKETIDFEKLGSNALFLINGPTGSGKTSILDAICFALYGETTSNE
RQGIQMRCDLASPQLLTEVTLDFSLHGKVYRVTRAPEQEAPKARGEGLTVRKHTASLYEL
GETEKLITSKTTQVKTEITNIIGLNETQFRQVMVLPQGKFRELLLATSKEREEIFGQLFE
TDIYKKIEYALKDKASSISKAKDEFDNQIRGALQVAGVTSEAELTEQRETLSVQFASAQK
REQGSLAQLNAVKTEIQRAETLSNEFKKREQAEASLHLHLQQTETISARQLQLENAKKAS
RIELPYITLQNAAQQVQDLNQKVAVLSQDLKAADDVLKTKEQAFQQAKEQANRVPTLTEQ
QYQLESMKSKLVEKVELDSAIAAGLQQKSEFEETLKKYIVFREKLTQDALQAQKVLEQAR
IDVASIGGVDAEIKQQQRLMSDLQKLGNLNQELSKLDALTSSKQASVTQAKSYYENLQRE
ADALELSWHNAQAAVLALRLQTGEKCPVCGSTEHPQPAQFVGDEVTKEQVQQARHQEREA
QITLNQLSNQLEQHNIAIAQYTQQIEQMVSELGQNANLELQALQASIHQLNERLQHLNAI
NIAQLEQSVNELNQRCVVGEGKINDLQNQRAANESTIKANQQQLAKLSASLGDKYTSLEQ
LENDLTQIHKQIVELNNGLESAQAQLQQAVLAKSNVDSQLTTHQQWLLEANSKLENAKTE
WESALKASAFADEAHFLQSKVSEQQTQTWQQEIDNFKQTKIQLEQTLADLNQVLKEVEKP
NLEALNGSLSTAQHSYLEIRNQLDSTRSLFEGLEKVRNEISNLHDKNRKLEEEYKVFGTL
YDVASGKTGSRISLHRFVLGVLLDDVLIQASQRLSLMSKGRYILARKTEGFKGAAGRGLD
LVVEDGYTGKMRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLDTLFIDEGFGSLDP
ESLDLAIQTLVDLQQTGRMIGVISHVSELKEQMALRIDVEPSRFGSTVSVKSQMLLSK
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatcaaactcacgatgcaagcctttggtccgtttgcgaaaaaagaaactatt
gattttgaaaagcttggaagtaatgctttatttttaattaatggacctactggttcaggt
aaaacctcgatcttagacgcgatttgctttgcgctatatggcgaaaccactagcaatgaa
cgtcaagggatccaaatgcgctgtgatttagcatcgccacagctgctaaccgaagtaact
ctagatttctctttgcatggcaaagtttaccgagtgactcgcgcgccggagcaagaagct
ccgaaagcccgtggtgagggcttgactgttcgcaaacacacggcgtcattgtatgaattg
ggtgagacagaaaaactcatcaccagcaaaacgacccaagttaaaactgagatcactaat
attattggtttgaacgaaactcagttccgtcaggttatggtattgcctcaaggtaaattt
cgcgagctgttattagcaacgtctaaagagcgtgaagagatctttggccagttgttcgaa
acggatatctacaaaaagattgaatacgccttaaaagacaaagcaagctcgataagcaaa
gcaaaagatgagtttgataaccaaattcgtggcgcgcttcaagttgcgggagtgacatca
gaagcggaattaacagaacaacgtgaaacgctgtctgtccaattcgcgtcagcgcaaaag
cgagagcagggatcgcttgctcagttaaatgccgtgaaaacagaaattcagagagctgaa
acgttaagtaatgaatttaaaaagcgtgaacaagcagaagcctcgctccatctgcacttg
caacaaactgaaaccatttcggctcgccaactgcagttagagaatgcgaaaaaggcgagt
aggattgaactgccttatatcacgctgcaaaatgccgcccagcaagttcaagatttaaac
caaaaggttgccgttctttctcaagatttaaaagccgctgacgacgtcttaaaaacgaag
gaacaagccttccaacaggcaaaagaacaagctaatcgggttcctacgctgacagagcag
caataccaacttgaaagcatgaaaagcaagttggtcgagaaggttgaactggatagtgcc
atcgctgcaggacttcagcagaaatcagaatttgaagaaacgctaaaaaaatacatagtg
tttagggaaaaactgacgcaagacgccctgcaagcgcaaaaagtgttggagcaagctcgc
attgatgtcgcaagtattggtggtgtggatgcagagatcaaacagcagcagcgtttgatg
tcggatcttcaaaagttaggtaatttaaatcaagagctttcaaagttagatgcattgacg
tcaagtaaacaagcctcggtaactcaagccaagtcttattatgaaaaccttcaacgtgaa
gcggatgcgttagagctcagttggcataatgcgcaagcggcagttcttgctcttcgttta
caaactggagagaagtgtcccgtttgtggtagtaccgaacatcctcagcctgctcaattt
gttggtgatgaagtcacaaaagagcaagttcaacaggctcgtcatcaggagcgtgaggct
caaatcacgctgaaccaattgagcaaccagttggaacaacacaatattgcgattgctcaa
tacacgcagcaaattgagcaaatggtttcggagttggggcagaacgcgaacctagagctg
caagcattacaggcatcaattcatcaactcaatgaacgattacagcatttgaacgcaatt
aatattgctcagcttgagcaaagcgtgaacgagttgaatcaacgttgtgtggttggcgaa
ggtaagatcaacgatttgcaaaaccagagggctgcaaatgaatcgacgattaaagcaaat
cagcagcagttagcgaaattgagtgcgtcattaggtgataaatacacatcactagagcaa
ctagaaaacgacttgactcagatacacaagcaaattgttgagctgaataacggcctagaa
tctgcgcaagcgcagttacaacaagctgtgctggcgaaatcaaatgtcgatagtcagttg
acgactcaccaacagtggctgttggaagcgaatagtaaactggaaaatgctaaaaccgaa
tgggaaagcgcactaaaagcgagtgcgtttgctgatgaagcgcacttcttacagagtaaa
gtgagtgaacaacaaactcaaacttggcaacaagaaatagataactttaagcagacaaaa
attcagttagaacaaactcttgcggatttaaatcaagttttgaaggaggtcgagaagcct
aatttagaagcgcttaacgggagtttaagtactgctcaacattcgtatctagaaattaga
aatcagctggatagcacgcgttcactgtttgaaggcttggaaaaagttcgcaatgaaatt
tctaatctgcacgataaaaaccgtaaattagaggaagagtacaaagttttcggtacgctt
tatgatgtcgccagtggtaaaacgggcagccgtatcagtttacaccgatttgtgttgggg
gttttattggatgatgtgttgattcaagcttctcaacgactgagtttgatgagcaagggt
cgatatattctagcgcgtaaaacagagggttttaaaggtgctgcagggcgaggacttgat
ctcgtggtggaagacggttacaccggaaaaatgcgtgatgttgcaacgttgtcgggggga
gaatccttcatggcagctttagctttggcattaggcttgtctgatgtcgtgcaatcttac
agcggtggaattcgtttagatacgttattcatcgacgaaggctttggtagcttggaccct
gaatctctcgatctggcgattcaaacattggtcgacttgcagcaaacgggccgcatgatt
ggcgtaatttcacacgtgtctgaactcaaagagcagatggcgttgcgaatcgatgttgaa
ccgtctaggtttggttctaccgtttcggttaaatctcagatgctattatctaaataa
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