Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_04510
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Entry
M636_04510 CDS
T02760
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpk03400
]
M636_04510
DNA repair and recombination proteins [BR:
vpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M636_04510
Archaeal homologous recombinant proteins
M636_04510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Metallophos_3
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AGQ96574
LinkDB
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Position
II:complement(991830..992963)
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AA seq
377 aa
AA seq
DB search
MKFIHTSDWHLGRQFHNVSLLEDQQAVLEQLIQYIENNPVDAVIVAGDVYDRSVPPTIAI
ELLNRVVKRICGELNTPMILISGNHDGAERLGFGSEQMKRSGLHIISNFEDMLTPVVIET
KAAGHVAFYGMPYNDPEQVRYVYKEPVSTHDEAHKLLAEKITEQFQSEHRNILISHCFVD
GAIESESERPLSIGGSDRVSHEHFLNFDYVALGHLHQPQKKGEEYIRYSGSLMKYSFGEQ
NQKKGFTLVEIGKDGFIGAEHIELTAPHEMRIVEGELEQILEWGKTDPKNEDYLLVRLMD
KHAILNPMEKLRTVYPNVLHLEKPGMLIGVEQEMAQAKLARSEIDMFKDFFAEAQDSELS
NEQEQAISNIIKQLSQQ
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatccacacctcagattggcatcttggccgacagtttcacaatgtctctttg
cttgaagatcagcaggcagttcttgagcaacttatccaatatattgaaaacaatccggtt
gatgctgtaatcgttgccggagatgtctatgatcgctccgttccaccaacgattgctatc
gagttgcttaatcgagtcgtaaagcgaatctgtggtgagctcaatactcctatgatattg
atttcaggcaatcacgatggcgcagagcgtttgggttttggttctgagcaaatgaaacgt
tcgggattgcatatcatcagcaactttgaagatatgttaacgccagttgtgattgaaacg
aaagccgctggtcatgtcgctttctatgggatgccatacaatgatcctgaacaagttcgt
tatgtgtataaagagccggtgtcgacacatgatgaagctcataaactgcttgccgaaaaa
attacagagcagttccaatctgagcatcgaaatattctaatcagtcattgcttcgtagat
ggtgctattgaatctgaatcagagcgaccgctctctatcggtggctctgatcgagttagc
cacgagcattttttaaacttcgattatgtcgcgttaggtcatttgcaccaacctcaaaag
aaaggtgaggagtacattcgttattctggttcgttgatgaagtacagcttcggtgaacaa
aatcaaaagaaaggcttcacattagttgaaatcggcaaagatggttttattggggcggaa
catattgagttaactgcgcctcatgaaatgcgtatcgttgaaggcgaattggaacaaatt
ctagagtggggcaaaacggacccgaaaaatgaagattatttactggtgagattaatggat
aaacacgccattttgaatccgatggagaaacttcgtacggtttacccgaatgttttgcac
ctagagaagccaggaatgctaattggtgtcgagcaagaaatggcgcaagctaagctcgct
cgcagtgaaattgacatgttcaaagatttctttgctgaagcacaggatagtgagttatca
aatgagcaagagcaagcaatcagcaacatcattaagcaactttcacagcagtaa
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