Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_05140
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Entry
M636_05140 CDS
T02760
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00061
Fatty acid biosynthesis
vpk00071
Fatty acid degradation
vpk01100
Metabolic pathways
vpk01212
Fatty acid metabolism
vpk02024
Quorum sensing
vpk04146
Peroxisome
Module
vpk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
M636_05140
00071 Fatty acid degradation
M636_05140
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
M636_05140
09145 Cellular community - prokaryotes
02024 Quorum sensing
M636_05140
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vpk01004
]
M636_05140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpk04147
]
M636_05140
Enzymes [BR:
vpk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
M636_05140
Lipid biosynthesis proteins [BR:
vpk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
M636_05140
Exosome [BR:
vpk04147
]
Exosomal proteins
Exosomal proteins of breast milk
M636_05140
Exosomal proteins of breast cancer cells
M636_05140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
VMAP-M8
Motif
Other DBs
NCBI-ProteinID:
AGQ96677
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All DBs
Position
II:complement(1130385..1132337)
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AA seq
650 aa
AA seq
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MAQQHNDWADITSLDTFPKVLQHNAKHWPEQVAMREKEFGIWREFTWQDYESRVKWMALA
LQDLGIGEQDVIGLLGDNRPEWVWGELAAHAIKGYSLGIYQDSMHEEVAYLINYAKAKVV
IAEDEEQCDKLLELGDEIPSVEYIIYCDPRGMRKYDDPRLIDVEQVYKKGQLIDKANPDK
YLNMVAATKGSDLSILCTTSGTTSKPKLAQLHSGTFLDHCAAYLRADPRSPGDNYVSVLP
LPWIMEQVYVVGQALISRQIVNFVEEQETMMSDLREIGPNFVLLAPRVWENIVADVSARM
MDSTPFKQKMYKLGMSLANKALDQGKRSKLAEWILLRALRDRLGFSNLSSAATGGAAMGP
DTFRYLQAIGVPLKQLYGQTEMCGAYTVHQADDVDYDSVGVAFDNADVKVINPDSNGVGE
IIAKSTGMFTGYLNNQAAYDEDVQDGWMHTGDAGYFKDSGHLVVIDRLKDMSETSHGDRY
SPQFIENKLKFSPFIAEVVVVGKGRPWLSAIICIRYAIVAKWAEQKGIAFTNYTNLSAQP
EVYKAIREEVLKVNESLPDAQKISKFILLYKELDADDGELTRTRKVRRGVVAEKYGDIIE
TIYSAAPTVDVDTVITYQDGTKTRIQTSLVIETLIQHELTLVDSEQRRIA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaacataatgattgggcagatataaccagcttagatacctttccaaaagtg
ttgcagcacaatgccaagcactggccagagcaagtggcaatgcgtgagaaagagttcggt
atttggcgagagtttacttggcaggattacgaaagccgagtcaagtggatggcattggcg
ctacaagatttaggcatcggcgagcaagatgtgattggcctgttgggggataaccgacct
gaatgggtgtggggtgaactggctgcgcacgcgatcaaaggctattcactgggtatctat
caagattccatgcatgaagaagtggcgtacttaatcaattacgcgaaagcgaaagttgtg
attgccgaagatgaagagcaatgcgacaaattgcttgagctaggcgatgaaattccaagt
gtggaatacatcatttactgcgatccacgcgggatgcgcaaatacgatgatccgcgactg
attgatgttgagcaggtttacaaaaaagggcagctgatcgataaagctaacccagataag
tatctcaatatggttgccgcaaccaaaggcagcgacctgtcgattttgtgtaccacttcg
ggtacgacgtccaaaccgaaattggcgcagttgcacagcggcacgttcttggatcactgt
gcggcttacttgcgtgcggacccacgttctccgggcgacaactacgtttctgttctgcct
ctgccttggatcatggagcaggtgtatgtggttggtcaggcgttgatttcacgtcaaatc
gtcaacttcgtggaagaacaagaaaccatgatgtcggacttacgcgagattggcccgaac
tttgtgctgcttgcaccgcgagtatgggaaaacattgtggccgatgtgtctgcacgcatg
atggactccactccgtttaagcaaaagatgtacaaactgggcatgagcttggcgaacaaa
gcgctggatcagggcaagcgttctaagttggccgaatggattcttctgcgcgctctacgc
gaccgtttaggtttctcgaatctgtcttctgcggctaccggtggtgcggcaatggggcca
gacacgttccgttacctgcaagcgatcggtgttccactcaaacagctttatggtcaaacc
gaaatgtgtggtgcgtacaccgtacaccaagccgatgacgtggattacgattccgttggt
gtcgcatttgacaatgcagacgtgaaagtcatcaacccagacagcaacggtgtaggtgag
atcattgcgaaaagtaccggcatgtttaccggctatctcaataaccaagcggcgtacgac
gaagatgttcaagatggttggatgcacacaggcgatgcgggctactttaaagattctggc
cacttagtggtgattgaccgtttgaaagacatgtcggaaaccagccacggcgaccgttac
tctccgcagttcattgaaaacaaactcaagttctcgccatttatcgcagaagtggtggtg
gtgggcaaaggccgaccttggctctccgcaattatctgtattcgttacgcgatcgtcgcc
aagtgggcagagcaaaaggggattgcgtttaccaactacaccaacctttctgcacagcca
gaagtgtataaagcgattcgcgaagaagtgctgaaagtgaatgagtcgctgccagacgca
cagaaaatcagcaaattcattctgctttataaagagctggacgcggatgatggcgagcta
actcgtacacgcaaagtacgtcgtggtgtggttgccgagaaatacggtgacatcattgaa
accatttacagcgctgcgccgactgtggacgtcgatacggtgatcacttatcaggatgga
accaagacacgcattcaaacgtcgctggtgatagaaacgcttattcaacatgagctgaca
ctggtggatagcgaacaacggaggatcgcatag
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