Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_05765
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Entry
M636_05765 CDS
T02760
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00550
Peptidoglycan biosynthesis
vpk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M636_05765
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vpk01002
]
M636_05765
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpk01011
]
M636_05765
Enzymes [BR:
vpk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
M636_05765
Peptidases and inhibitors [BR:
vpk01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
M636_05765
Peptidoglycan biosynthesis and degradation proteins [BR:
vpk01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
M636_05765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AGQ96786
LinkDB
All DBs
Position
II:complement(1260388..1261557)
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AA seq
389 aa
AA seq
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MRKNTLFNTTFLTGLATFSHFAFAAPTVVPNAPELSSRGYVLMDYHTGKVLVERDADKRL
NPASLTKLMTAYVAGQEVNAGNISLDDQVVISRNAWARNFPDSSKMFIEVNTSVSLSDLY
RGLVVQSGNDASVAIAEHVAGSEAGFVSLMNSWASQLGLTNSSFTNPHGLDSDGLYSTPH
DIAKLGQAIIRDLPDIYPMYSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGYTSGAGYS
LATSATNGDMRLIAVVMGAKSQSVRESESKQLLSYGFRFYDTLMPTAAGTDIANARVWMG
QKDELKVGVNRDVYLTLPKGDVNKLKAEVEYNGDLLAPIAQDQVVGTLLYKVDGKVVKET
ELVALEPVEEGGIFKRIMDWFKQLVASWF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaataccttattcaacacgactttccttaccggccttgctaccttctctcac
tttgcctttgctgcaccaactgttgtcccaaatgcacctgaattaagctcccgcggttat
gtactgatggactatcacacaggtaaagtgttggtagagcgcgatgcagacaagcgatta
aacccagcgagcttaactaagttgatgactgcttatgttgcaggacaagaagtaaacgct
ggtaatatcagtctcgatgatcaagttgtcattagtcgcaacgcttgggcgagaaacttc
ccagattcttccaaaatgttcatcgaagtaaacacatctgtgtctctgtctgatttatat
cgaggattggtggttcagtcaggaaacgatgctagtgttgccattgcagagcacgtcgct
ggcagcgaagcaggctttgttagcttaatgaatagttgggcgagtcaacttggtttgacg
aattcctcatttactaaccctcacggtttagatagcgatggtttgtattcaacaccgcat
gatatagctaagttgggtcaagcaatcattcgtgatctgccagatatttatccgatgtac
agtgaaacgtcttttacgtacaacggtattactcaatataaccggaatggcttacttcgt
gatcgcagcatgaacgttgacgggatgaaaacgggctataccagtggtgcaggttacagt
ttggcgacgtcagccaccaatggtgacatgcgccttatcgcagttgttatgggggcgaag
agccaaagtgtgcgtgaatcagaaagtaagcaacttcttagttacggttttcgattctac
gataccttgatgccaacggccgcaggaactgatatcgcaaacgctcgcgtttggatgggg
caaaaggatgagttaaaagttggcgtgaaccgcgatgtttatctcactctgcctaaaggt
gacgtaaacaaacttaaagcggaagtggaatacaacggtgatttacttgcgccaattgct
caagatcaggtagttggtactttgctatacaaagtggatggaaaagtcgtgaaagagacc
gagctagttgcactcgaaccagtggaagaaggcggtatttttaaacgtattatggattgg
tttaagcaactggtagcaagctggttttaa
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