Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_06200
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Entry
M636_06200 CDS
T02760
Name
(GenBank) peptidase
KO
K19236
L,D-transpeptidase YcfS
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
M636_06200
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vpk01002
]
M636_06200
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpk01011
]
M636_06200
Peptidases and inhibitors [BR:
vpk01002
]
Cysteine peptidases
Family C82
M636_06200
Peptidoglycan biosynthesis and degradation proteins [BR:
vpk01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
M636_06200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
AGQ96859
LinkDB
All DBs
Position
II:complement(1378039..1378965)
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AA seq
308 aa
AA seq
DB search
MLSKKRSMSFAKRTLLSVSLSLVSGLSFAKMYELPEDGSRLIGRLENHVVQEGETMANIA
KHYDVGMLALMAANKGVDPFLPQEGRVLTIPSQLILPEVPHQGIVINLAELRLYYFPEGE
DVVHVFPVGIGRIGRDTPVMTTSISQKRPNPTWTPPASIRAEYRAKGVDLPAVVPAGPDN
PLGLFALRLAYGNGEYLIHGTNKDFGIGMRVSAGCIRMDPSDIEWLFDKVRRGEKVNIIN
QPVKVSLEPDRSVFVEAHEPLTRSNGEKDHLQVPKELGWWLNEFGLTNVKAKAVIAAQNG
VPVEITAP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcttagcaaaaagcgatcaatgagttttgcaaaacgaaccctgttatctgtctcgtta
tcattagtgagtggattgtcattcgccaaaatgtacgagttaccagaggacggcagccgt
ttgattggtcgcctcgaaaaccacgtcgtgcaagaaggcgagaccatggcaaacatcgcc
aagcattacgatgtaggtatgctagcgttgatggcagcgaacaaaggtgttgatccattt
cttcctcaagaagggcgcgtgcttactattccatctcaacttattcttcctgaagttcct
caccaaggcatcgtgattaacttggcagagctgcgtttgtactacttcccagagggcgaa
gatgtggtgcatgttttccctgttggtattgggcgaattgggcgagatacaccagtgatg
acaaccagcatcagccaaaaacgtccgaacccaacatggacgccacctgcgtctattcgt
gcagaatacagagcgaaaggggtggatttacctgcggttgtgccagcaggccccgacaac
ccgcttgggttgtttgcacttcgtctagcttacggaaatggtgagtaccttattcacggt
accaacaaagatttcggcatcggaatgcgcgtgagtgctggttgcattcgtatggaccca
agtgatatcgaatggttgttcgacaaggttcgtcgtggtgaaaaagtaaacatcatcaat
cagccagtgaaagtgtcactagagccggatcgtagtgtgtttgtggaagcgcatgaaccg
ttaactcgcagcaatggcgagaaagatcatttacaagttccgaaagaattgggctggtgg
ctaaatgaatttggattgacgaatgtgaaagcgaaagccgttattgccgctcagaatggg
gttccagtagaaataaccgcgccttaa
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