Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_06955
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Entry
M636_06955 CDS
T02760
Name
(GenBank) GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00730
Thiamine metabolism
vpk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
M636_06955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpk03009
]
M636_06955
Enzymes [BR:
vpk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
M636_06955
Ribosome biogenesis [BR:
vpk03009
]
Prokaryotic type
GTPases
M636_06955
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
ABC_tran
MMR_HSR1
Dynamin_N
GTP_EFTU
FeoB_N
AAA_29
DUF5906
Septin
nSTAND1
AAA_33
AAA_22
AIG1
AAA_16
AAA_28
ATP-synt_ab
AAA_7
MeaB
IstB_IS21
AAA_25
NB-ARC
nSTAND3
Roc
Motif
Other DBs
NCBI-ProteinID:
AGQ96995
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All DBs
Position
II:1538353..1539429
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AA seq
358 aa
AA seq
DB search
MNQTHTFCDTLISTSNPLKRLGWKPFFQQQLTLDDYDNTIFARVIAHHRSGYLLATEAGQ
VHLNVHHSLPNMTVGDWVILNEDQQFVRLLDRLSLFSRKAAGSKVAEQLIAANVDTVFIV
CSLNHDFNLSRIERYLALVHEADVEPVIVLSKADLCDDVDELKSLVQKLDPLLVIETVNG
LDAESTSKLMSWCNEGQTVAFIGSSGVGKSTLVNALLGQQEQSTGYIREDDSKGRHTTTS
RSIHLLPAGGILIDTPGMREIQLVDCEAGVSEAFADVEALAEHCRFGDCKHQTEPGCAVQ
AAIENGSLEVRRFNNYQKLLREQAFNGATLAEQRAQSRQFGKLTRNVMSDKRKRQQSY
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacacatactttttgtgacacattaatttccacttcaaacccattaaagcga
ttgggttggaaaccattttttcagcaacaactgacactagacgactacgacaatacgatc
tttgcacgcgtgatcgcgcatcaccgaagtggttatttgttggcaacagaagcagggcaa
gttcaccttaatgtccaccactctctgcccaatatgaccgtcggagactgggtgatctta
aatgaagatcagcaatttgttcgcttactggatcgcttgagcctctttagccgcaaagcg
gcgggcagcaaagtggcagagcaactcatcgcggccaatgtcgatacggtgtttatcgtc
tgctcactcaatcacgatttcaacttaagccgtattgaacgttacttagccttagttcac
gaagctgacgtcgagcccgttatcgtgctttccaaagccgatttgtgcgacgacgtcgat
gaactcaaaagcctagtacagaagctagaccctctgctagtcattgagacggtcaacggc
ttagatgcagaaagtacttctaagctcatgagctggtgtaatgaggggcaaaccgttgct
tttatcggttcatcaggggtgggtaagtcaacgctggtcaacgcgttacttggtcaacaa
gaacaatcgacagggtatatccgtgaagacgacagcaaaggacgccatacaacgacctcg
cgctcgattcacctattacctgcgggcgggattttgatcgatactccaggaatgcgagaa
atccaactcgtcgattgcgaagctggtgtcagcgaagcctttgctgacgttgaagcgctt
gccgagcattgtcgatttggtgactgtaaacaccaaaccgagccaggttgtgccgttcaa
gcggccattgaaaatggctctcttgaagttcgccgtttcaacaattatcaaaagctgctg
cgagaacaagcctttaatggtgcgaccttagcagagcaacgggctcagagccgacaattt
ggcaaactcactcgcaatgtgatgagtgataaacgcaaacgtcagcaaagttactga
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