Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_07120
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Entry
M636_07120 CDS
T02760
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00300
Lysine biosynthesis
vpk00470
D-Amino acid metabolism
vpk01100
Metabolic pathways
vpk01110
Biosynthesis of secondary metabolites
vpk01120
Microbial metabolism in diverse environments
vpk01230
Biosynthesis of amino acids
Module
vpk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M636_07120
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M636_07120
Enzymes [BR:
vpk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
M636_07120
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGQ97026
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All DBs
Position
II:1588444..1589646
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AA seq
400 aa
AA seq
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MPNSLSLPTRVSQQVHTLAQQQNQPLCAYLYDLNALEKHIKQLRHVLPKNVELFYAAKAN
PSGLILKTLAPYVDGFEAASGGELTHLHQQQLDKPLIFGGPGKMPSELQQAIELDVDAIH
VESLTELQRIGALTERLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALM
LLRDFPQVSLKGFHFHLMSHQLDVERHLALMQRYFQVVKTWQQEFELGELMINLGGGMGI
NYQNPEQHFPWMEFCDKLEFLIAKEQVQHWTLRFECGRFITAACGYYVMEVLDIKQNLGE
NFVIARGGTHHFRTPAAQSHDHPFVILKSEQHHEISHPIQHAQATFVGQLCTPKDVLARN
QHVAHVDIGDYVVFTLAGAYAWNISHQNFLMHEPPIFHYF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcctaactcactctctctaccgacacgcgttagccaacaagttcacacgctcgcacag
cagcaaaatcagcccttgtgcgcgtacttgtatgacctaaacgccttagaaaaacacatc
aaacaactgcgtcacgttttgccgaaaaatgtcgagctattttacgcagccaaagccaat
ccatcgggccttattcttaaaacgctcgcgccgtatgtcgatggttttgaagcggcatct
ggcggggagttgacacacctccaccaacaacaactcgataagccattgatcttcggtggc
ccaggaaaaatgccaagtgaattgcaacaagcgattgagctggatgttgatgcaattcat
gtcgaaagcctcaccgagctgcaacgcattggagcactaaccgagcgtctcaaccgccct
gcttcgatctttttacgtatgaacattgatattggcgacatcacgctcagcaagttggcg
atgggcggcaagccgactccttttggtttggacgagtccgaactgagtaatgctttgatg
ttgctgcgcgatttcccgcaagtgtcactcaaaggcttccattttcacttgatgtcgcat
cagctcgatgttgaacgtcacttagcgttaatgcagcgctatttccaagtcgtgaaaacg
tggcaacaagagtttgaactcggtgagctgatgatcaacttgggcggcggcatgggcatc
aactaccaaaaccctgagcaacactttccgtggatggagttttgcgacaagttggaattc
ctcatcgctaaagagcaagtgcaacattggacactgcgttttgaatgcggacgtttcatc
acggcggcatgcggttattacgtgatggaagtgctcgatattaagcaaaatcttggcgaa
aactttgtcatcgcacgcgggggaactcaccacttccgcacgccagcagcgcagagccat
gatcatccattcgtcatcctgaaaagcgagcaacaccatgaaatttctcatccaattcag
catgcacaagcaacttttgtcggccagctttgtacgcccaaagatgtgctggcacgcaat
caacacgtcgcccacgtcgatattggtgattatgttgtgtttaccttagcgggcgcctat
gcgtggaacatctcccatcaaaacttcttgatgcatgaaccgccgatcttccactatttc
taa
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