Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_07850
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Entry
M636_07850 CDS
T02760
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk03030
DNA replication
vpk03430
Mismatch repair
vpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M636_07850
03430 Mismatch repair
M636_07850
03440 Homologous recombination
M636_07850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpk03032
]
M636_07850
03400 DNA repair and recombination proteins [BR:
vpk03400
]
M636_07850
Enzymes [BR:
vpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M636_07850
DNA replication proteins [BR:
vpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M636_07850
DNA repair and recombination proteins [BR:
vpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M636_07850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Motif
Other DBs
NCBI-ProteinID:
AGQ97156
LinkDB
All DBs
Position
II:complement(1739465..1740175)
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AA seq
236 aa
AA seq
DB search
MIKRWFKRWETPLSPEQKRQAIHVIDDWPMVLKDYLQRPLVDDSTTLKDLSFVALDFETT
GVDAQGDKILSIGVVDLTLDGIDIASSKEWYICHGQFIKPETAQINGLTPQDLAKGLPLD
EGMNRLLERITGKVVLAHGCCIEKTFIHAYFSSRYQVEDFPAYFIDTLQIEKQFSYAGKS
GAHSSYQLDDLRRYYHLPGYLSHSAASDALACAELFLVQSKKLTALPDVTLRQLMR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacgttggtttaagcggtgggaaacgccgctctctcctgagcaaaaacgccaa
gccattcacgttattgacgattggccaatggtgctgaaagactatcttcaacggcctttg
gtggatgactcaacgaccttgaaggatttgagttttgttgcgttggactttgaaaccaca
ggcgtggacgcgcaaggtgataaaatcttatcgattggcgtggttgacctaacgctggac
ggcattgatatcgccagctccaaagagtggtacatttgccatggacaattcatcaaacca
gaaacagcgcaaattaatggcttaactccgcaagatctcgccaaaggactgccattggat
gaaggtatgaatcggttgctggaacgcatcacaggaaaagtggtgctcgcccacggatgc
tgcattgaaaaaaccttcattcacgcttacttttcctctcgctaccaagtagaggatttc
cccgcgtattttatcgacactctgcaaatcgaaaagcagtttagctatgcagggaaaagc
ggcgcgcacagcagttatcagttagacgatttgcgccgctactatcacctgccggggtac
ttatcgcactcagccgccagtgatgccttggcgtgcgcggaattgttcttggtgcaaagt
aaaaaactgaccgcgcttccggatgtcacgttgcgtcagttgatgcgctga
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