Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_07920
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Entry
M636_07920 CDS
T02760
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00040
Pentose and glucuronate interconversions
vpk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
M636_07920
Enzymes [BR:
vpk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
M636_07920
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Methyltransf_21
Motif
Other DBs
NCBI-ProteinID:
AGQ97170
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Position
II:1755234..1756400
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AA seq
388 aa
AA seq
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MAKGDVITLNFETFVDSDTQVKVTRLTPTDVICHRNYFYQKCFTQDGKKLLFAGDFDGNR
NYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTV
DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL
EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESC
THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDGSLMVGD
GCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTP
NDDGVLFTSDFEGVPAIYIADVPESYKH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggtgatgtgattactctcaacttcgaaacgtttgttgatagtgatacccaa
gtgaaagtgacgcgattaacgccaacggacgtgatttgtcaccgtaactacttttaccag
aagtgctttactcaggatggaaaaaagctgctgtttgcaggtgatttcgacggaaatcgc
aactattacctgcttaaccttgaaacgcaacaagcagtccaactgacggaaggtaaaggt
gacaacacctttggcggtttcatttcgacggatgagcgtgcatttttctacgtgaaaaac
gaactgaatttgatgaaagtcgatttagaaacgctggaagaacaagtcatttatacggtc
gatgaagagtggaaaggctacggtacttgggtggcaaattctgactgtaccaagttagtc
ggcatcgagattttaaaacgtgattggcaaccgctgacttcgtgggaaaagtttgccgag
ttctaccacaccaatccaacttgtcgcctaattaaagtggatatcgaaaccggtgagctg
gaggtgatccatcaagacactgcgtggctaggtcacccgatttaccgtccgtttgatgac
tcaacggttggtttctgtcatgaaggtccacatgatttggtggatgcgcgcatgtggctg
gtcaatgaagatggcagcaacgttcgtaaaatcaaagagcacgcagaaggtgaatcgtgc
acgcacgagttctggattccagatggcagcgcaatggcgtatgtttcttacttcaaaggt
caaactgatcgcgtgatttacaaagccaacccagagacattagagaatgaagaagtgatg
gtgatgccaccttgttctcacctcatgagtaacttcgatggttctttgatggtcggtgat
ggttgcgatgcgccagttgatgttgcagatgcagacagctacaacatcgaaaatgacccg
ttcttgtatgtattgaacacaaaagcgaaatcggcgcaaaaactgtgtaagcacagcaca
tcttgggatgtgttggatggcgatcgccaaattactcacccgcatccgtcattcacaccg
aacgatgatggtgtgttgtttaccagtgactttgaaggcgttcctgcgatttacattgcg
gacgtgccggagtcttacaaacactga
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