Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_08395
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Entry
M636_08395 CDS
T02760
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpk03021
]
M636_08395
Transcription machinery [BR:
vpk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
M636_08395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AGQ97500
LinkDB
All DBs
Position
I:52838..55747
Genome browser
AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPVTRVTFNVGDV
IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAVVLREIFLSNQIRFNKPQDKLYAGQI
DRMDNFVLRYRALTNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
DAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE
GLAERTPGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEEQYAPVADAITSLF
SGEKLPDEAKNQITELLSEQDVEPLFRIIESNSDEEAKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPARNVHLMPMDIPQQYTTSMRVAGMIGGKMSSEARAMKNLYPEEIFQEFE
GDDASWWQFDSRVNWLLEKVKEKRGEKILVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQNRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDALIEILASGD
TSTLDEIIEESAKLNKELKSQLEQGRDRLLEMHSNGGEKAQQIVEKIESTDGDTNLVTFA
LSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTILLELIYAVDAQAPKRSGITRFLPKT
PIRLMMDSRGNDLSAQVEFEGFNRQLSPVNRHLGSKLVTSVQKDVHRLIEAGDVLVEEKV
EAVRKQAQQDMQQSLNAELERLQALKAVNPNIRDEEIEAIEAQIKELTGYINQAQVQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctttggggcagcgctggattagcgatacggaaagcgatttaggtttaggt
accgtagtagcaatggatgctcgtactgtgacattgatgtttgcagcgtcagaggaaaac
cgagtttacgcacgtaacgatgcacctgttacccgagtaacgtttaacgtcggtgatgtc
atcgattgccaagaaggttggtctctgaaagttgaagaagtactggaagatgaaggtctg
tacacctatttcggtactcgtgaagacacgcaagaaaccgcagttgttctgcgtgagatt
ttccttagtaaccaaattcgtttcaacaaacctcaagataagttgtacgccggtcaaatc
gaccgcatggacaacttcgttcttcgttaccgtgcgctaaccaatcagtttgaacagcac
aagagcccaatgcgtggcttgtgtggtatgcgagcaggtttgatccctcatcagctttac
atcgcgcacgaagtcggtcgccgtcacgcgccacgcgttttgttggcggatgaagtaggt
ttgggtaagaccatcgaagcgggtatgatcattcaccagcaagtgctgtctggtcgtgct
gaacgcattttgattgtggtgcctgaaacactgcaacaccaatggctagttgagatgatg
cgtcgtttcaacctgcatttctcgatcttcgacgaagagcgttgtattgaagcattcgcg
gacgctgaaaacccatttgatactcagcaatacgtgctgtgttcactcgatttcctacgt
aagagccgcaagcgttttgaacaagcactagaaggcgaatgggatctacttgttgtcgat
gaagcgcatcaccttgagtggagccaagacaaaccaagccgtgaataccaagtggtagaa
ggcttggctgaacgtactccgggcgtgttgctactgacggcaacgccagaacagcttggt
cgtgaaagccactttgctcgtctacgcctgctggatcccgatcgtttctatgattacgaa
gcgttcgtcgaggaagaagagcaatacgcgcctgtagcggatgcgattacttcactattc
tcaggcgaaaagctgcctgatgaagcgaaaaaccagatcactgagctgttgtctgaacaa
gacgtagaaccacttttccgcattatcgaaagcaacagcgatgaagaggcgaaagcatca
gcgcgccaagagctaatcgataacctaatggaccgtcacggtacggggcgtgttttgttc
cgtaacacgcgtgcggcaatcaaaggtttcccagcgcgtaatgtgcaccttatgccgatg
gatatcccacagcagtacaccacgtcaatgcgtgtggcagggatgattggcggtaagatg
agttctgaagcacgtgcgatgaagaacctgtacccggaagaaattttccaagaatttgaa
ggcgatgacgcaagctggtggcagtttgactcacgtgtgaactggctacttgaaaaagta
aaagagaaacgcggcgagaagattctcgtgattgcttctcgtgcgagcacggcattgcaa
ttggagcaagcgctgcgtgaacgcgaaggcatccgtgcgacggtcttccacgaaggcatg
tcgattcttgagcgcgacaaagctgcggcttactttgcgcaagaagaaggcggtgcacag
gttctgatctgtagcgaaatcggttctgaaggtcgtaacttccaatttgccaaccaattg
gtgatgttcgacttgccattcaacccagacttgcttgaacaacgtattggtcgtttggac
cgtatcggtcaaaaccgcgatatcgacattcatgttccttacctgaaaggtacatcgcaa
gcgatccttgcgcgttggttcgatgaaggtctgaacgcctttgcagaaacctgcccgaca
ggtcgtgcggtttatgacaagtactcagacgctctgattgagattctggcgtcaggagat
accagcactctggatgagatcatcgaagaatcagcgaagctgaacaaagaattgaaatcg
caactagagcaaggtcgtgaccgcttgctagaaatgcactctaacggcggcgaaaaagct
cagcaaatcgttgagaaaattgaatcaactgatggtgatacaaacctagtcacgtttgcg
ctttctctgtttgatacgattggtttgaaccaagacgacaaaggcgaaaatgcactggtg
gtgacgccatcagagcacatgatggtgccaagctaccctggtttgccatacgaaggtgcg
acgatcacttttgatcgcgataccgcgctttctcgtgaagacatgcacttcatcagttgg
gaacacccaatgatccaaggtggtatcgatcttctgatgagtgaaggtgtgggtacttct
gcggtatctctgttgaaaaacaaggcgttgccagttggtacgattctgcttgaactaatt
tacgcggtagatgcgcaagcaccaaaacgcagcggtatcactcgtttcttaccgaaaacg
ccaatccgtctgatgatggactcgcgtggtaacgatctatcggctcaagtagagtttgaa
ggtttcaaccgtcaacttagcccagtaaaccgtcatcttggcagcaagctggtgacgtct
gtgcaaaaagacgtgcaccgtttgattgaagcgggtgatgtgctggttgaagagaaagtg
gaagccgttcgtaagcaagcgcagcaagacatgcaacaaagcttgaatgcggagctagag
cgtttacaagctttgaaagcggtgaacccaaacattcgtgatgaagagattgaagcgatt
gaagcgcaaatcaaagagctgactggttacatcaatcaagctcaagtgcagctagattcg
ctccgtctgattgtggtgagccacaactaa
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