Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_09680
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Entry
M636_09680 CDS
T02760
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpk03016
]
M636_09680 (truB)
Enzymes [BR:
vpk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M636_09680 (truB)
Transfer RNA biogenesis [BR:
vpk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M636_09680 (truB)
Prokaryotic type
M636_09680 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGQ97695
LinkDB
All DBs
Position
I:311922..312866
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AA seq
314 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPVDVTLEKLEACIEKFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTAVAKYPYEKMVTLEQLNELLEQAHREEIAPRELLDPLL
MPMDTAVEDLPEVNLIPELADMVQHGQPVQVLGAPEQGSLRLTMGEEHLFIGVGEMNDDG
KIAPKRLVVFRDEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaattaatggtgttatcttgttggataaaccaaca
ggtatctcttccaatgatgcactgcaaaaagtaaagcgaatctactttgctgagaaagcg
ggtcacactggtgcgttggaccctctagcgacgggtatgttgccgatctgtttaggtgaa
gcaaccaagttttctcagttcctactggattcagacaaacgctatcgcgtgatcgcgaaa
cttggcgaacgtactaacacttcagactctgatggtgaagtggttgaaacgcgtccagta
gatgtgactctcgagaaactagaagcgtgtattgagaagttccgtggcgaatctgaccaa
gtgccttcgatgttttctgctttgaaataccaaggcaaacctctgtacgagtacgctcgt
aaaggtatcgaagttccacgtgagtctcgtaaaatcaccgtttacgaaatcgttcttcac
cgttttgaaggtgatgaagttgagatggaggtgcactgttcaaaaggcacttacattcgt
actatcgtcgatgacttgggcgaaatgctcggttgtggtgctcacgtaacgatgctgcgc
cgcacagctgtagccaagtacccttacgagaaaatggtgactcttgagcagcttaatgag
ctacttgagcaagctcatcgtgaagaaatcgctcctcgcgagttgctcgatccactgctt
atgccaatggataccgcagttgaagacttgccagaagtaaacctaattcctgaattagcg
gatatggttcagcatggccaaccggttcaagtattaggtgcaccagagcaggggtctctg
cgcctgactatgggcgaagagcatttgttcatcggtgttggtgaaatgaacgatgatggt
aagatcgcaccaaaacgtttagtcgttttccgcgacgaagagtaa
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