Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_10055
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Entry
M636_10055 CDS
T02760
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M636_10055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpk03400
]
M636_10055
Enzymes [BR:
vpk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M636_10055
DNA repair and recombination proteins [BR:
vpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M636_10055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGQ97764
LinkDB
All DBs
Position
I:397913..401404
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AA seq
1163 aa
AA seq
DB search
MFTVYHSNQVDVLKSLLVELIRISPLENPFEKEQILVQSPGMSQWLKMELAKEFGVAANI
DFPLPATFIWEMFTQVLPDVPKRSAFNKEAMTWKLMHLLPGLLNQDVFSPLAQYLKDDSD
HSKLYQLAEKIADIFDGYLVYRPEWIASWEAGQSVAELEDEHPWQPILWQALYDHTVSLG
QSPYHRANLYEHFIDTLASFNGNFDHLPKRLFVFGISSLPPRYMDALKAIGEHIDVHLMF
TNPCRYYWGEVRDRKYLARLAARHRQHVVWQDDHSEVQGETEQLKGSLEDNVIDELHTDV
VGNSLLASMGKLGRDNMYLLSQLESHEIEAFVDVERDSLLHQLQADILNLEEHQDDQQIE
NSHHKQVVSLGDKSLSLHACHSPMREVEVLHDQLLAMFDADPTLKPRDIIVMVADINAYS
PAIQAVFGNAPGERFIPYSISDRTADQESPILAAFMQLVNLPNTRCLASELLELLETPAI
LKRFELSEDDFLQAKQWVEESGIRWGLDANTGREFELPETRQNTWQFGIQRMLLGYAMPE
SAGLFETEQGSLSPYNEVQGMGAELAGKLAHFIQQISTYRSKLSHVQTIDGWRETLVSLQ
DDFFSVELEGEMALKSIRDTLSQLKEQLADAAFDDALSPSIISQYLQNKLSGTRVSQRFL
AGQVNFCTLMPMRSIPFRTVCLLGMNDGVYPRSMPPEGFDLMTGRTKPGDRSRRDDDRYL
FLEAMLSAQQTLYISYVGRSIQDNTERVPSVLVSELMEYCHQNYCLSGDEALPVDESGDN
LLNALVNTHAMVPFSPSAFQGTHASYAKEWIPAALTQSSQSQGYVRRDFNRALDDYLLGA
TFPLELDLVELQRFWRLPVQYFFNRRLKVIFEPPLPVMEDDEPFVLGGLESYQMRDELLE
TLLETTLMQPEKKTEVLKHFMSQQRAQGKLPVGAFGDIEFETNRVQAEELVDKLAFLSGA
PQDDLEIDLTFDSLFERNEGEEKNVRLTGWLTQCYQSGLIRYRSGKIRSQDYLAAWIDHL
AMSASGYAKKTHLIGYDRKEGALHLIYPEIADVQYAKQLLTELVRLFFEGMTKPLPYFPK
TALACVEAGFSRGQWVDDEEKSLKKMADAFNDGFMSPGEGNNAYISRIWPAWNDELASEV
RLLTALVLQGARLAVQDADDVKA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactgtttatcactccaaccaagttgatgttcttaaatcactccttgtcgaactg
attcgaatcagtccgctggaaaacccgttcgaaaaagaacaaattctggttcaaagtccg
ggcatgtcccaatggctaaaaatggaattggccaaagagtttggtgttgctgcgaacatt
gattttccgctccctgctaccttcatttgggaaatgtttacgcaggtgttgccagacgtg
cccaagcgcagtgcgtttaacaaagaagcgatgacgtggaagttgatgcatctgctaccg
gggcttctcaaccaagacgtgttttcgccgttagcgcagtacctcaaagatgacagtgac
cactctaagctgtatcagctggctgagaaaattgccgatattttcgatggttacttggtg
tatcgtccggaatggatcgcaagttgggaagctgggcagagtgtggcagagctggaagat
gagcatccgtggcagccgatcttatggcaagcgttgtacgatcacactgtgtcattagga
cagtctccttatcaccgtgccaacctttatgagcactttatcgacacgttagcgagtttt
aacggcaattttgaccatttacccaagcgtttgtttgtttttggtatttcctcgttaccg
cctcgctatatggatgcgctaaaagcaattggtgagcatatcgatgtgcatctgatgttc
accaacccgtgtcgctattactggggtgaagttcgagatcgcaagtatctggctcgtttg
gcagcgagacatcgtcagcacgttgtgtggcaggacgatcactcggaagtgcaaggtgaa
actgagcaactgaaaggctcattggaagataatgtgatcgatgagctgcacaccgatgtg
gtcggcaacagcctgttggcgtccatgggtaaactcgggcgcgacaatatgtatttgttg
tctcagctggagtctcatgaaattgaagcgtttgttgatgttgagcgcgacagtctgctc
catcaattgcaagcggatattctcaatcttgaagaacatcaagatgatcaacagattgaa
aacagtcatcacaaacaagtggttagcttgggtgataaatctctgagcctacacgcttgt
cacagcccgatgcgtgaagtggaagtgctgcatgatcaactattggcgatgttcgatgct
gacccaacgttaaaaccgcgcgatattatcgtgatggtcgcggacatcaacgcttacagc
cctgcgattcaggcggtctttggtaacgcaccgggtgagcgttttattccatattcgatt
tctgaccgaaccgccgatcaagagagcccaattctggccgcatttatgcagttggtgaac
ttacccaatacgcgctgtttggcatcagaactactcgaacttctggaaactccggcgata
ttaaagcgttttgaactcagcgaagatgatttcttacaagccaaacaatgggttgaagaa
tcgggaattcgctgggggttggatgccaataccggacgcgaatttgaactgccggaaacc
cgtcaaaacacatggcaatttggtattcaacgcatgttgcttggctacgcgatgccagaa
tccgcaggtttgtttgaaaccgagcaaggcagtttatctccgtacaacgaagtgcaaggc
atgggtgcagagcttgcgggcaagttggcacactttatccaacaaattagcacttatcga
agcaaactttctcatgttcagactattgatggttggcgagagactttggtttcactgcag
gatgacttcttctcagttgagttagagggcgaaatggcgctcaaatccattcgcgatacg
ctcagccaactcaaagagcaattagctgatgccgcatttgatgatgcgttgtcgccgtcg
atcatcagccaataccttcaaaacaaattatctggcacacgagtcagccagcgcttcctg
gctggtcaagtgaacttttgtaccctgatgccgatgcgctctattccgtttagaaccgtc
tgtctactggggatgaatgacggcgtgtacccgcgttccatgccgccagaaggctttgac
ttgatgacgggaagaaccaaaccgggcgaccgttcgcgcagagatgatgaccgttaccta
ttcctcgaagcgatgttgtctgcacagcaaacgctctacatcagttatgttggccgttca
atccaagacaacaccgagcgagtgccttcggttctggtttctgagctgatggaatactgc
caccaaaactattgtttaagtggtgatgaagcgttgcccgttgatgagtctggcgacaac
ttattaaatgcgttggtgaatacccacgccatggtgccgtttagcccaagtgcgttccaa
ggcacgcacgctagctacgcgaaagagtggattccagcggcattgactcaaagtagtcaa
tcgcaaggctatgttcgtcgtgattttaatcgggcattagacgactatctgttaggagcg
acgttcccacttgagctcgacttagtcgagttgcaacgtttctggcgcttaccggtgcag
tattttttcaatcgtcgcttaaaagtaatctttgagccgccactgccggtgatggaagac
gacgaaccctttgttttaggtggtttggaaagttatcaaatgcgtgatgagctgttagaa
accttgcttgaaacgacattgatgcagccagagaaaaaaacagaggtgcttaaacacttt
atgagtcaacagcgcgcgcaaggcaaactgccggtgggggcgtttggtgatatcgagttt
gaaaccaaccgagttcaggcggaagagctggtggacaaactggcgtttttatctggtgcg
cctcaagacgatttggaaatcgacctgacgtttgattccttgtttgagcgaaatgaaggc
gaagagaaaaacgttcgcctaacaggttggctaacccagtgttaccaatctgggttgatt
cgttaccgaagcggtaagattcgctcgcaggattaccttgcagcgtggatcgatcacctt
gccatgtcggcgtcgggttatgccaagaaaactcatctgattggctacgatcgtaaagaa
ggcgcgctgcatttgatctacccagaaattgccgatgtgcagtatgccaaacagctactg
actgaattagttcgcttattcttcgaaggcatgactaagcctttgccttatttcccgaaa
acggcgttggcttgtgttgaagcgggctttagccgtggtcagtgggtcgatgacgaagag
aaatctttgaagaaaatggctgacgcattcaatgatggcttcatgagcccgggcgaaggc
aataatgcgtacatctctcgaatttggcctgcttggaatgatgagttggcctcagaagtt
cgtttgctgacagcattagtactgcaaggtgcgcgcttagcggttcaagacgctgatgac
gtaaaagcgtaa
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