Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_10070
Help
Entry
M636_10070 CDS
T02760
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M636_10070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpk03400
]
M636_10070
Enzymes [BR:
vpk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M636_10070
DNA repair and recombination proteins [BR:
vpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M636_10070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
SH3_13
Helicase_RecD
AAA_11
SLFN-g3_helicase
Viral_helicase1
UvrD-helicase
AAA_22
AAA_16
nSTAND3
UvrD_C
DEAD
CbiA
AAA_28
MukB
TrwB_AAD_bind
ResIII
T2SSE
AAA_7
NTPase_1
DUF87
SRP54
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AGQ97766
LinkDB
All DBs
Position
I:405406..407553
Genome browser
AA seq
715 aa
AA seq
DB search
MTTNHNLHSDQDSLLVVLERLAYKGAIRQLDYQFACFIDSQAHDEQSDSQALAFIAGVVS
SELGKGHICLPLFDAQGLSTDLASKLGLFGESALALNTQLQGIDWIQVLKNSTVVGAQGE
ALPLMFDGERLYLHRYWHYEVTLAEKLNHLGAAVNLQPQEFARLSELLNHLFARQYHFLF
NALGKAVEAGSSNQVLRQQLVCDHLDVVASESLDWHAIDSVLSNARKVQDLQTLDELVPL
SACVNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALIEQATHEKNLTIKLVAPTG
KAAARLTESIGKAVQELPVSPELKAKIPTESSTLHRLLGAIPNSAEFRHNKQNPLHLDIL
VIDEASMVDLPMMYKVVDALPKHARLILLGDKDQLASVEAGAVLGDICSFHALGYGKEQA
SAIAKLTGFGTLAHTGNSASSIADSLCMLQKSYRFDARSGIGQLAKAVNSGSAASVDNVW
ARDFSDIEHFALSSQHYNQMMQTLVQEYGRYLKRIGQQETDPKTGEPESLTHKAKAVLDT
FNQCRLLCAIREGDFGVAGLNQRIEKALAARKFIQVQDEIWYHGRPVMVTRNDHGLGLYN
GDIGICMRDDSEEEPRLKVFFELPDGSVKSVLPSRVPEHETAYAMTIHKSQGSEFDYTLM
ILPPDFSPILTRELIYTGITRAKKRLALYAELNVLKRGIKVKTTRASGLVHRLTN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaatcacaatcttcattctgaccaagatagcctattggtagtgttggaacgc
ttggcgtacaaaggtgctattcgtcagctcgactaccaattcgcctgttttattgattct
caagcgcatgatgaacagtcggacagtcaagcattggcgtttatcgcgggtgttgtcagt
agtgagctcggtaaaggacatatctgtctgcctctgttcgatgcacaagggctatctacg
gatttggctagtaagttagggctgtttggtgagtcggcattggcgctcaacacacagttg
caaggcatagactggattcaagtattaaaaaattccaccgtggtcggcgcgcaaggagaa
gccttgccgctgatgttcgatggcgagcgtctgtatctgcaccgctattggcattatgaa
gtgactctggcggaaaagcttaatcacttgggcgccgcagttaacttgcaaccacaagag
tttgcgcgattatccgagttgctcaaccatttatttgcacgccaataccattttctgttt
aacgcgttaggcaaagcagtagaagcgggaagcagcaaccaagtgttgcgtcaacaattg
gtgtgtgaccaccttgatgtggtcgcaagcgaatcgttggattggcacgccattgattcc
gtgcttagcaatgcgcgcaaggttcaagatttgcaaacactggatgaactcgtaccactc
tcagcttgtgtgaactggcaaaaagtcgcggcggcggttgcgttaactcgtcgatttgct
gtgatttctggtggcccaggtacgggtaaaacgacgacggtaaccaaattgcttgctgct
ttgattgaacaggcgacgcacgagaaaaatctaaccatcaagctggtggccccgacgggg
aaagcggcggcgcgattaaccgagtccattggtaaagcagtgcaagaactgccagtttct
ccggagctaaaagccaaaattccgactgaatcgagcaccttgcatcgattacttggcgcg
attcctaatagcgcagaatttcgtcacaacaagcaaaatccactgcatttggatatttta
gttatcgacgaagcgtcgatggtcgatttgccaatgatgtacaaagtagtcgatgcctta
ccgaaacatgcgcggctgattttgttaggtgataaagaccaacttgcctcagttgaagca
ggggctgtgttgggtgatatctgttcgttccatgcattgggttatggcaaagagcaggcg
tcagccatcgcaaaactgacggggttcggtactttagcccatacgggtaacagtgcatct
agcattgccgatagtttatgtatgctgcaaaagagctaccgatttgatgctcgctcaggc
attggtcagttggcaaaagcggttaactcaggttctgctgcgagcgtagataacgtctgg
gcgcgtgacttttccgatatcgaacatttcgcactaagtagtcaacattataaccaaatg
atgcagacgttggtgcaggaatacggtcgttacctcaaacgcattggacaacaggaaact
gatcctaaaaccggagagccagagtcgctaactcataaagccaaagcggtattagatacc
ttcaaccaatgccgactgctgtgcgcaatccgtgaaggtgacttcggtgtggctgggcta
aaccaacgcattgagaaagcgctcgcggcgcgcaagttcattcaagttcaggatgaaatt
tggtatcacggcagacctgtcatggttacgcgtaatgatcatggtttaggtttgtataac
ggtgatattggtatttgtatgcgagatgacagtgaagaagaaccgcgtttgaaagtcttt
ttcgagttacctgacggcagtgtgaaatcggtcttgccaagccgagtacctgaacatgaa
acggcttacgccatgaccatccataaatcgcaaggcagtgaatttgattacaccctgatg
attttgccaccagactttagcccgatattaacccgtgagttgatttacacaggcattacc
cgcgcgaaaaagcgtttagctctttacgccgaactcaatgttctgaagcgaggcattaag
gtgaaaactactcgcgcgagtggattagtacatcggcttactaactaa
DBGET
integrated database retrieval system
