Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_10445
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Entry
M636_10445 CDS
T02760
Name
(GenBank) murein transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpk01011
]
M636_10445
Enzymes [BR:
vpk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
M636_10445
Peptidoglycan biosynthesis and degradation proteins [BR:
vpk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
M636_10445
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
AGQ97834
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Position
I:complement(481424..483010)
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AA seq
528 aa
AA seq
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MRLKYSWALVLLLSGCQLTQPNSSTTPTPETNKSEQTAKQNATKTKSKNKQSLAKDSAKD
TPKVLSPQEQEDVWQRIAMQLEMDIPNNKKVDYYRTWYLKHPNHLYTVSKRAAPFLYMIT
QRIEERGLPMELALLPVVESSFDAFAYSHGSAAGLWQFVPGTGKMMGLEQNYWYDGRRDV
AASTDAALDYLVQLNERFDGNWEHAIAAYNSGGGRVSSAIRKNKKLGKPVDFFSLDLPKE
TSSYVPKLLALADVVANQEKYGIDIPSIPNKPVLTLVDPKEQLDLAIAADYAGIGVKELQ
SYNPAYNQWSTAPEGPHQLLIPVEKKDAFLTQVESNRGKGMKVARYKVKSGDSLSMLAKK
YGTTSKVIRRANGLSNNNIRIGQYLLIPTSTKDDSKYALTAQNRLNKTQSQARGQLKLSH
VVQSGESLWSIARDNKVSHKSLAKWNGMGPKDTLRVGQKLVIWKKSDQGAVIRTVFYNVR
SGDTISGIASKFKVKSNDIVKWNSLHKQKYLKPGQKLKLYVDVTKVSV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgaagtatagctgggcgttggtgttgttattatctggctgtcaattgactcag
ccaaattcgtccaccactccaactccagaaaccaacaagtcagagcaaactgctaagcag
aatgccactaagactaaatctaaaaacaaacaatctttggcgaaagattctgccaaggat
acgccaaaagttctctcccctcaggaacaagaagatgtgtggcaacgtattgctatgcag
cttgaaatggacatcccaaacaacaagaaagtggattattaccgtacgtggtatttgaaa
cacccaaaccacctgtacacggtatctaaacgtgcagcgccatttctttacatgatcacg
caacgtatcgaagaacgtggtttgccaatggagcttgctcttctaccggttgtggaaagc
tcatttgacgctttcgcctactcgcacggtagcgcagcaggtttgtggcagtttgtgcca
ggcaccgggaaaatgatggggcttgaacaaaactactggtatgacgggcgtcgtgatgtc
gctgcctctaccgatgctgcattggattatcttgttcaattaaatgaacgttttgatgga
aactgggaacacgcaatcgcagcctacaatagtggcggcggtcgtgtatctagtgctatc
cgtaagaacaaaaaattgggtaaacctgtcgactttttctctttagatctgccaaaagag
accagtagctacgtgccaaaacttctcgctcttgcggacgtggtggcaaaccaagaaaag
tacggtatcgacattccatctatcccaaacaaaccagtgctgacgttagtcgatccgaaa
gaacaactggatctcgctatcgctgctgattacgcgggcatcggggtaaaagagctgcaa
agctacaaccctgcctacaaccaatggtccaccgcaccagaagggcctcatcagcttctt
attcctgtggagaagaaggatgcgttcttaactcaagttgagagcaatcgcggtaaaggc
atgaaagtcgcgcgttacaaagtcaaatctggcgactcgttgagtatgttggcgaagaaa
tacggtacgacctcaaaagtgattcgtcgtgctaacggcctgtcgaacaacaacattcgc
attggtcagtacttacttattccgacgtcaaccaaagacgattcaaagtacgcacttaca
gcgcaaaaccgtttgaacaaaacgcaatcgcaagctcgtggccagctgaaactgtcacac
gttgtgcaatcgggtgaaagtttgtggtctatcgctcgtgacaacaaggtttcacacaaa
tcactagcaaaatggaacggcatgggaccaaaagataccctgcgcgtcggtcaaaagctg
gtgatttggaaaaaatcagaccaaggcgccgtgattcgtaccgtgttctacaacgttcgc
tctggcgacaccatcagtggcatcgcaagcaaattcaaggtgaagagcaacgacatcgta
aaatggaactcgctgcataagcagaagtacctaaaaccgggtcaaaaacttaagctgtac
gtagatgtaactaaggtaagtgtatga
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