Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_10580
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Entry
M636_10580 CDS
T02760
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00300
Lysine biosynthesis
vpk01100
Metabolic pathways
vpk01120
Microbial metabolism in diverse environments
vpk01230
Biosynthesis of amino acids
Module
vpk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M636_10580
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vpk01002
]
M636_10580
Enzymes [BR:
vpk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
M636_10580
Peptidases and inhibitors [BR:
vpk01002
]
Metallo peptidases
Family M20
M636_10580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M42
STELLO
Motif
Other DBs
NCBI-ProteinID:
AGQ97861
LinkDB
All DBs
Position
I:complement(508668..509804)
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AA seq
378 aa
AA seq
DB search
MTDSPVLALAKDLISRQSVTPEDAGCQDLMIERLKALGFEIEVMVFEDTTNFWARRGNEA
PLFAFAGHTDVVPAGKLEQWDTPPFEPTIIDGYLHGRGAADMKGSLAAMVVAVERFIAEH
PDHKGSIGFLITSDEEGPFINGTVRVVEALMERGENIDMCIVGEPSSTEIVGDVVKNGRR
GSITGDLTVKGTQGHVAYPHLANNPVHASLLAIHELATTEWDKGNDYFPPTSFQIPNVSA
GTGASNVIPGEFNVQFNLRFSTELNNDTIVQRVTETLDKHDLNYDLHWTFNGDPFLTDTG
ALLDAVVAAVAEVNNTKPALLTTGGTSDGRFIARMGGQVVELGPVNATIHKVNECVKVDD
LEKLTDMYENTLKHLLAK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagtccagtactggcacttgcaaaagacctgatcagccgccagtccgtaaca
cctgaagatgcaggttgtcaggacctaatgatcgagcgtttaaaagcgctcggttttgaa
attgaagttatggtgtttgaagacaccaccaacttttgggcgcgtcgcggtaacgaagcg
ccattgtttgctttcgcaggtcacacagatgtcgtacccgcaggcaagctagaacaatgg
gatacaccaccgtttgagccaaccatcattgatggttaccttcatggtcgcggtgcggcc
gatatgaaaggctctttggcggcaatggtagtggccgttgaacgtttcattgccgagcac
ccagatcacaaaggctcgattggctttttgatcacttctgatgaagaaggccctttcatt
aacggtaccgttcgcgtcgtagaagcgctgatggaacgtggtgagaacatcgacatgtgc
atcgttggtgagccttctagcacagaaattgtgggcgatgttgtgaaaaatggccgccga
ggttcgattaccggtgacctaaccgtaaaaggcacacaaggccatgttgcctaccctcac
ctcgctaataaccctgttcacgcatcgctacttgccatccacgaactggcaacaacagag
tgggataaaggcaatgattacttcccgccaacaagcttccagattcccaatgtatctgcg
ggtacaggggcatctaacgtaattcctggcgagttcaacgttcaattcaacctacgtttt
agcaccgaactgaacaatgacactatcgtccagcgcgtaacagaaacactggataagcat
gatctcaactacgatctacattggacattcaacggcgacccgttcttaacggacacgggt
gccctacttgatgctgtggtcgctgccgtagcggaagtgaacaacactaaacctgcgctg
ctcacaacggggggtacatcagacggacgtttcattgctcgcatgggcggtcaagttgtt
gagcttggacctgtcaatgccacgattcacaaagtgaacgagtgcgtaaaagtggacgat
cttgagaagttgactgacatgtacgaaaacaccttaaaacacctactcgcgaagtaa
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