Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_11025
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Entry
M636_11025 CDS
T02760
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk03030
DNA replication
vpk03430
Mismatch repair
vpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M636_11025
03430 Mismatch repair
M636_11025
03440 Homologous recombination
M636_11025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpk03032
]
M636_11025
03400 DNA repair and recombination proteins [BR:
vpk03400
]
M636_11025
Enzymes [BR:
vpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M636_11025
DNA replication proteins [BR:
vpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M636_11025
DNA repair and recombination proteins [BR:
vpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M636_11025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
ResIII
AAA_14
AAA_2
AAA_30
PIF1
AAA_18
AAA_assoc_2
mono-CXXC
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AGQ97948
LinkDB
All DBs
Position
I:598517..600652
Genome browser
AA seq
711 aa
AA seq
DB search
MSYLALARKWRPNKFDQVVGQKHVLTALENALAQNRLHHAYLFSGTRGVGKTSIGRLFAK
GLNCETGITATPCGECATCREIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV
DDIHQQLDYILGQEQVSAESKALGMISHAADGSMRDALSLADQAIALGNGAVQTDIVSHM
LGTIDTDQAIHLLESISSKQPQQAMDKIHQLAANGVEWDGLLQQIATQLHRIAMYQALPA
SLDRAQPDAEKIELLSKALSPQDVQLYYQIALKGREDLTLSPNGRVGMEMIVLRMLAFRP
SANNGANIVTAGSQPQLSQMPNASLTNSAPAQQAPVAQQQSRPNPVQAQQSVSQPVRPSV
NQPASMNEEPQYQPDYQTGGYDMSPPQYDMAPPMSENPAPEAQPQQESAPAPSRMGAAGL
RHQLRSQRKQGLQQNTTQNGGTKKPKAASAKPESVIDRVAQLHGNSAQVSPNSTPKPTEP
EVEEAYRWRPSKPVETKVNTKLTPTQLKQALEHEKTPEMAQKLIDESLEQNEWAKMISLM
NLPKLVEQLALNSHYSKEGSTVSLQLRSSQAHLNTDRAQSELLNALNTVLGEECHLSIEV
GESGETPLELRDRLYQEKLQQALNSLENDPNVDFIERRFAAELDKDSVRPI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttagctttagcgcgaaaatggcgtcctaataagtttgaccaagtcgtaggg
caaaaacatgttctaacggcactggaaaacgcattggcgcaaaaccgtttacatcatgct
tacctattcagtgggacgcgtggtgtgggtaaaaccagtatcggccgtttgtttgccaaa
gggttgaactgtgagactggtatcaccgccacaccatgtggtgaatgtgctacctgccga
gagattgatgaaggtcgctttgttgacttgcttgagattgacgcggcatcacgtactaaa
gttgaagatactcgcgaactgctagacaacgttcaatacaaacccgctcgtggacgtttt
aaagtgtacctcatcgatgaggtgcacatgctgtcgcgtcactctttcaatgcgttatta
aaaaccttggaagagccgccagagtatgtgaagtttttgctcgcaacaaccgatccacag
aagctgccagttaccattttatctcgttgtctgcagttccatctcaagccaatcagtgtt
gatgatattcatcagcaacttgactacattttgggtcaagagcaggtttcagcagagtcc
aaagcgctcggtatgatctcccatgcagctgatgggagtatgcgtgatgcgctgagtttg
gccgaccaagcgattgctttaggcaatggtgcggtgcaaaccgacatcgttagccacatg
ctgggaaccatcgatacggatcaagcgattcacttgcttgagtcgatcagcagtaaacaa
cctcaacaagccatggataaaatccaccaattggcggcgaatggtgttgagtgggacggt
ttattgcaacaaatcgcgacgcagttacatcgcatcgctatgtatcaagcactgcctgcg
tcactagaccgagcacagcctgatgcagaaaaaatcgaattattaagtaaagcgctcagc
ccacaagatgtgcagctttactatcaaattgcgctaaaaggtcgtgaagatctgacgctg
tctccaaatggccgtgttggtatggagatgatcgtcttacgtatgttggcttttcgtcca
tcagcgaataacggtgcaaatatcgttaccgcaggatctcaacctcagttgagtcagatg
ccaaatgcgagtctaacgaattcagcgccagcacagcaggctccggtagcacaacagcag
tcgcgcccaaatccagtgcaagcgcaacaatctgtttcgcagcccgttcgtccgtcagtg
aatcagcctgcgtcaatgaatgaagagccacaatatcagccagattatcagactggtggt
tatgatatgtcgcctcctcagtacgacatggctccgccaatgagcgaaaacccagcgcca
gaggctcaacctcagcaagaaagcgcacctgcgccatcaagaatgggtgcggcaggctta
cgtcatcaattacgttcacagcgtaagcagggtttacagcaaaacacaacgcaaaatggt
ggcacaaaaaagcctaaagcggcatctgcaaaaccagaatcggtcatcgaccgagtagcg
caattgcatggcaattccgcgcaggtgtcgccaaactcaacgccaaagcctactgaacca
gaagttgaagaagcgtatcgctggcgtccaagtaagcctgttgagacgaaagttaatact
aagctgacacctacgcagctcaagcaagcgcttgagcatgaaaaaacaccagaaatggca
caaaagctgattgatgagtcacttgaacaaaacgagtgggcgaaaatgatcagtttgatg
aacttgcctaagctggtggaacaacttgcgctaaactctcactatagtaaagaaggctcg
accgtttctttacagttgagaagcagccaagcacacttaaatacagatagagctcaaagt
gagctgcttaacgcactaaacacggttttaggtgaagagtgtcacttgagtatcgaagta
ggagagagtggcgaaacaccacttgaactgagagacagactctatcaagagaaattacaa
caagcgctgaacagcttggagaacgacccgaatgtcgactttatcgagcgtcgttttgct
gcagagcttgataaagatagtgtgcgccctatctaa
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