Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_12060
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Entry
M636_12060 CDS
T02760
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpk03009
]
M636_12060
Enzymes [BR:
vpk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
M636_12060
Ribosome biogenesis [BR:
vpk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M636_12060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AGQ98127
LinkDB
All DBs
Position
I:828628..829566
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AA seq
312 aa
AA seq
DB search
MSEKLQKVLARAGHGSRREIESLIKSGRVSVNGVVAKLGERLEDESSVVRIDGHIVSAKV
QEEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTT
DGELANRLMHPSRQVEREYLVRVFGEVTEQKVRNLVKGVELEDGLARFEDVVYAGGEGMN
HTFYVVINEGRNREVRRLWESQECTVSRLKRVRYGDIFLDKKLPRGGWMELDLKEVNYLR
ELVELRPEKETMLDLSKDNTSRKRERARSQKIRRAVKRHEERVSTSKGRSNNPARRKPKK
NAGEQGARNKHR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagttacaaaaagtattagcacgtgctggacacggttctcgtcgtgagatc
gaatcgttaattaaatccggacgcgtaagcgtgaacggtgtggtcgctaaacttggtgaa
agactggaagatgagagcagtgtagttcgtatcgatggtcacattgtatctgcaaaggtt
caagaagaagtgatctgtcgtgtacttgcgtactacaagcctgagggtgagctgtgtact
cgtcatgacccagaaggccgtcgcacggttttcgaccgtctgccaaaaattcgtggctct
cgttggatctctgttggtcgtttggatgcaaacacgtctggtctgctacttttcactact
gatggtgaattagcaaaccgtctaatgcacccaagtcgccaagttgagcgtgaataccta
gtgcgtgtgtttggtgaagtaaccgaacaaaaagttcgtaatctagtaaaaggggttgaa
ctggaagacggtttagctcgctttgaagacgttgtctacgcgggtggtgaaggtatgaac
cacactttctacgtagtgatcaacgaaggtcgtaaccgtgaagttcgtcgtctatgggaa
tctcaagagtgtaccgttagccgtctgaaacgtgttcgttacggtgatatcttcctagac
aaaaaactgcctcgtggcggttggatggaactggatctgaaagaagtaaactacctgcgt
gagcttgtagaacttcgcccagagaaagaaaccatgctagatttgagcaaggataatacg
tcacgtaagcgtgaacgtgctcgcagccaaaaaatccgccgcgcggttaagcgccatgaa
gaacgtgtaagcacgtctaaaggtcgcagcaacaatcctgctcgtcgtaagccaaagaaa
aatgctggcgaacaaggtgcacgcaacaagcatcgttaa
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