Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_12170
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Entry
M636_12170 CDS
T02760
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpk03032
]
M636_12170
03400 DNA repair and recombination proteins [BR:
vpk03400
]
M636_12170
Enzymes [BR:
vpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
M636_12170
DNA replication proteins [BR:
vpk03032
]
Prokaryotic type
DNA Topoisomerases
M636_12170
DNA repair and recombination proteins [BR:
vpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M636_12170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF6674
ApbA
Motif
Other DBs
NCBI-ProteinID:
AGQ98140
LinkDB
All DBs
Position
I:853056..855692
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AA seq
878 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKAEIETEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIIDLIRKAPTPAEAKAGLIARGWDLGNVA
AMLERAGTDAARPEWLEPQYGIRDGQYFLTEQQAQAILDLRLHKLTGLEHEKILAEYKEL
LEEIAELMHILASTERLMEVIREELEAVRDGFADARRTEITAASHDIDMEELIAREDVVV
TLSHEGYVKYQILSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEDGERITAILPVDEFSADKFIFMATGDGTVKKTSLD
QFANVRSNGLIAVNLRDDDSLIGVDITTGSSDIMLFSKAGKVVRFSEDKVRAMGRTAAGV
RGMKLADDDQVVSLIVPSNEGDILTVTQNGYGKRTELAEYPTKGRATQGVVSIKVSERNG
PVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAEDESVVGLQRIDE
VEEVELPEGEEAETTEANAEQQAPEAPAADDAEEGTEE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagctaaagagatcacgcccgtaaacattgaagatgagcttagaggttca
tacctagactacgcgatgtcagttatcgtgggtcgtgctcttccagatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttattcgcgatgaacgtactaggcaacgattggaac
aaaccatataaaaaatcagcccgtgttgtcggcgacgtaatcggtaaatatcacccgcac
ggtgatagtgctgtgtacgacacaatcgtacgtatggctcagccgttctcacttcgttac
atgctggtcgatggtcaaggtaactttggctcaatcgatggcgactctgctgcggcaatg
cgttacaccgaagtacgtatggcaaaaattgcccacgaacttttggctgacctagacaaa
gaaaccgtagactacgtacctaactatgacggtacagaacagattccagcggttcttcca
accaaaattccaaacctattggtaaacggtgcttctggtatcgcggtaggtatggcaacc
aacatcccgccacataaccttggcgaagtgatcgatggctgtcttgcatacatcaataat
gaagaaatcactattgatgaactaatggattacatccctggtccagatttcccaactgcg
gcgcttatcagcggtcgtaaaggcattgtagacgcgtacaaaacaggtcgcggtaagatc
tacatgcgttcaaaagcggaaatcgaaacagagaaaaacggtaaagaaaccatcatcgtt
accgaaattccttaccaagtgaacaaagctcgtctgatcgagaagattgctgaacttgtt
aaagataagaaagttgaaggcatcagtgcgctacgtgacgaatctgacaaagatggtatg
cgtatcgttattgaatgtaagcgtgatgcagtaggcgaagtggttcttaacaacctttac
gctcaaactcagctacaaacgactttcggtatcaacatggttgcgttgaacaatggtcag
ccacagctattcaacctgaaagatatgttgaagtgctttgtggatcaccgtcgtgaagtc
gtgactcgccgtactatcttcgaattgcgtaaagctcgtgagcgtgcgcacattcttgaa
ggtcttgcacttgctctagcgaacatcgatgaaatcatcgacctaattcgtaaagcgccg
actcctgctgaagcaaaagctggtcttattgctcgtggttgggatctaggtaacgtagca
gcaatgcttgagcgtgctggtactgatgcggctcgcccagaatggctagagcctcaatac
ggtatccgcgacggtcaatacttcctgactgaacaacaagcgcaagcaattctagatcta
cgtctacataaattgaccggtctagaacacgagaagattcttgctgaatacaaagagctt
ctagaagaaatcgctgagttaatgcacattcttgcaagcactgagcgtttgatggaagtg
attcgtgaagaactagaagcagttcgtgacggatttgctgatgcacgccgtactgaaatc
acagcagctagccatgacattgacatggaagagctgattgctcgtgaagacgtagtcgta
actctatctcacgaaggttacgttaagtaccaaatcctaagcgactacgaagcacagcgc
cgtggtggtaaaggtaagagtgcaactcgaatgaaagatgaagactacattgaacgtctt
ctagtggcgaatacccacgacaacattctatgtttctctactcgcggtaagacttaccgt
ctgaaagtttaccaattgccactagcgagccgtactgcacgtggtaaaccgatcgtgaac
atccttccactagaagatggtgagcgtatcactgcaattcttccggttgatgagttctca
gcagacaagttcatcttcatggcaactggcgacggtaccgttaagaagacttctctagac
cagtttgcgaacgtacgttcaaacggtctaattgcggtgaacctacgtgatgacgattct
ctaatcggcgttgatatcacaacgggttcaagcgacatcatgctgttctctaaagcaggt
aaagttgttcgctttagcgaggacaaagtacgtgcaatgggtcgtacagcggcaggtgtc
cgtggtatgaagctggctgacgacgaccaagtagtttcactgatcgttccgtctaacgaa
ggcgacatcctaacggttactcaaaacggttacggtaaacgtaccgagctggctgaatac
ccaacgaaaggtcgtgcaactcagggcgttgtgtctatcaaggtttctgagcgtaatggc
ccagtagttggcgcagtgcaagtagaagaaggcgacgagatgatgatgatcaccgacgct
ggtactctggttcgtacacgtgtagcagaagttagccaagtaggccgtaacactcaaggt
gtaacgctgatccgtacagcagaagacgagtcagttgttggtctacaacgtatcgatgaa
gttgaagaagtggaattgccagaaggcgaagaagcggaaacaacagaagcgaatgcagaa
cagcaagctcctgaagcgccagcagcagacgacgcggaagagggcacagaagagtaa
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