Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_13555
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Entry
M636_13555 CDS
T02760
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpk03000
]
M636_13555
Transcription factors [BR:
vpk03000
]
Prokaryotic type
Helix-turn-helix
Other families
M636_13555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA
PAS_4
AAA_3
MCM
GdpP_PAS
DUF2089
HTH_22
HTH_7
PAS_9
HTH_29
AAA_16
HTH_50
HTH_23
HTH_11
RsgA_GTPase
HTH_Tnp_IS1
HTH_17
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AGQ98271
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Position
I:complement(1102844..1104604)
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AA seq
586 aa
AA seq
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MELQHISDNNWLSTSWIRSEQAGLKQRRRPEDIRVTPATLQDRRHQLNFLLETVTQFALP
LFNQLFAHSDSRLILTDADGVIIGSWGQPKFREKLTEIALSSGACWQEKVKGTNAIGTAI
IEAKPVSVIGDQHFIQHHRFISCSANPIFDHLGHLIGVLDITSEQKKHDFSTQVLVQNMV
QQVENQLLNLIPQGHIRVDLACEKGLLSSGWQGIIIANEDGQILAHNQVASQLLAQQNVI
GQSLDDILSIQSADHPFVFKTKPLTDKKVKSRSVTASNDLHYGDSTVEHCWQQANRVIDK
DISLLILGETGVGKNEFVKALHKNSQRKTGPLVSVNCGALPKDLVESELFGYVAGAFTGA
NSKGYQGKIRQAHKGILFLDEIADLPLEAQSRLLHVLQDKTVLPVGSNQSVQVDTQIIAA
THKDLDSLVSEGLFRQDLYYRLNGLIIELPRFEERDDKQQLIANIHRRHAQSEQQLCPHL
LSLLLSYSWPGNLRELDSLIKVSALMAQGEETLELAHVPTHLSKKLSQAQDVTTAAEPTL
KLRATVEDKLLKTYQANQGNISKTSRMLGVSRNTIYRKLKSLGILG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcaacacattagcgataacaactggctttctacgtcatggatccgaagtgaa
caggcgggtttaaaacagcgtcgacgccctgaagatattcgagtgacaccagcgacactt
caagataggcgtcaccaactcaacttcttattggaaaccgtcacccagtttgctctcccg
ctgtttaatcagctttttgctcacagtgacagccgcttaattctgacggatgccgacggc
gtcatcatcggcagttgggggcaacctaagtttcgcgaaaagttgaccgaaatagcgctg
agttcgggggcgtgttggcaagaaaaggtcaaaggcaccaacgcgattgggactgcgata
attgaagcaaaaccggtctctgtcatcggcgatcaacacttcatccaacaccatcgtttt
attagctgctcggccaatcctattttcgatcatcttggtcatttgattggcgtattagat
atcaccagcgagcaaaagaaacatgacttctcaacgcaggtgctggtacaaaacatggtg
cagcaggttgaaaatcaattgcttaacttgattccacaagggcatattcgtgtggatttg
gcgtgtgagaaaggcttactgagcagtgggtggcaagggattatcatcgccaatgaagat
ggacagatccttgcgcacaaccaagttgcttctcagctcctcgcgcaacaaaacgtcatc
gggcaatcgctcgacgacattctttctatccaaagtgccgaccatcctttcgtgttcaaa
acaaagccgctgaccgacaaaaaagtgaagtctcgttccgttaccgcttccaatgatctg
cattatggtgattccactgtcgagcattgctggcaacaagccaatcgcgttatcgataaa
gacatcagtttactgattctcggagaaactggggtcggtaaaaatgagtttgtaaaagcg
ctacataaaaacagccagcgaaaaactggccctttggtttccgtcaactgtggtgcacta
ccgaaagatttggttgagtccgaattgtttggctatgtagctggtgcctttactggcgca
aacagcaaaggctatcagggtaaaattcgtcaggctcataaagggattttatttctggat
gaaatcgccgacttaccgttagaagctcaaagccgattgcttcatgtgcttcaggataag
accgtacttcccgttggttcaaaccaaagtgttcaagtcgatacgcaaatcatcgcggcc
acgcataaggatctcgatagcttggttagcgaaggattgttccgtcaagatttatactat
cgtctcaatggtttgatcatcgaattgcctcgctttgaagaacgagatgataagcaacaa
ctgatcgcgaatatccatcgacgtcatgctcaatctgaacaacaactctgtcctcaccta
ctttctctgctgctttcttactcttggccaggaaacctgcgagaactcgatagtttaatc
aaagtatccgcgttaatggcgcaaggtgaagaaacgttggagctcgctcacgtaccgact
cacctgagtaagaagctcagccaagctcaagacgtaacaaccgctgcagagccaacatta
aaactgcgtgcaaccgtcgaagacaaactgcttaaaacatatcaagcaaatcagggcaac
atcagtaaaacctctcgtatgcttggcgtgagtcgaaatacgatttatagaaagctgaaa
agccttggcatattgggttaa
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