Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_14280
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Entry
M636_14280 CDS
T02760
Name
(GenBank) type IV secretion protein Rhs
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
DUF6531
PIN-TPR-GreABC
Motif
Other DBs
NCBI-ProteinID:
AGQ98387
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All DBs
Position
I:complement(1271636..1276012)
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AA seq
1458 aa
AA seq
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MIPQFVIPLTNCLGQSYHFSSQPIPKGEHKKFDSEQSAKAFLDDFVPLSSSRVEELYHLL
DQFPPNVPDEELTPELYAPVFAKALVNGSLYVASFPKTKKNATISSEPTPVPKQVKAKSK
QNKAHTSSKTQAKNSASAKPLQTGSECHEKAGDPVSLVTGEEILTLNDVELPNGFVWSRT
YRSSKASRNQGLGYGWRHAFQFELKEVTDEKHNVTSWEFVSDSADEIEFEPVEHGSTSYQ
VYVGASCHFLNPNTRIVTLSSGDQYRFELVEDIWLLKQIRNGIFSTFQLRYSRNHRLIEV
AHSKRPVLECQYDKQGRLVELLNAKTEQVLTTYIYDDQDDLVSAKNDLGLTERYEYQDQH
LIAKRVRPTGFTHYFEWSGEGSSAKCIRNFGDSGIYDYRFHYEGAKSSYSDSLDNEWTFI
HDEQGHLLEKSSPTGRTWQWHYDHLGRKEKAVFPDNSTTQYQYNQQGQLISKLHSSGAQI
QYGYDSLGKLVKTVSPDGDLEKGYYNSLGQRVWDIDALGCVTEYEYDKHGQVVKRESEDG
KKSRWWWDKQQRLVAHEVDGTLLRYSYGATDLVNGIAYPDGCVAQISYDDYGRRTSIRYF
NDEDQVGYSEEYAYDEFSRVAQIHTPEGVTSYQWGALAQQEAVIFPDGSHISYEYDQQRN
LTKLVRSDGLEFEFLYDSEGLLSGTLGFDGLHSQFKYDSMGRIIRKDVADRTVLYRYDDA
GFLQHIKAGNGKNIVENHFNYTLGGRLTLASNRHQTLQYQYSSFGHLTKRIQGQFEIGEE
FNRVGQRVSQTLPDKTSLNFSYDTNGRLSEIRFSDDSLPKIEFQYDVMGRLSVTETASFK
ESKLYDGVGRLVEQQWSGREKKYIYNAQNRISSILDNTAGATHYQYDTLGHVTKVSEASS
TSTFESDSFGNPALADSKVMSDRIEAYAGVRYKYDQQGNQVKREGDGTVQKRVFDALNQL
VEVHGDSSISHYEYDALGRRTKKITQHGITEFLWEGERLLGERTADGFRWYLYQPETYIP
LAVLENGSIYLYECDQVGKPERLKDSAGNIVWSASYDVHGFASIDVEEVRNPLRFQGQYF
DQETNLHYNLARYYDPKLGRFIQQDPISIAGGINHYQYAINPIQWIDPTGFLCEEGLKRL
QQMLADYQAQNNVPQEVCDQILEAAKESSVGEDGVRSQVKIRKPKGKNHIRYEYDLDHID
CERNEITFYRHINHSDGSRHEVQYVVGIEEFVNAHVFDSEKVGGEEGCTIFTEDLVLNKA
EYKENSELNTSDYELTERNKAKIDECLKERQEAMDARSGEEGYNAQIGNINQQSAKIGEL
AADDFVRSKRPNAKLLHPKDIGTSISKPGDFDMVYEVEDPPPGEIIIVEAKGGSSPLGSR
KIGNEACQQGTAKYAAAIVGKMSRNGRNTTEWEAAKSIRNASRSGRPIRYIHTKTPISES
GRVSKVKVKEFNVDLGKF
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgattcctcaatttgttatccctctcaccaactgccttggtcaaagctatcatttttcc
agtcagccaatcccaaaaggtgaacacaaaaagtttgactcagaacagagtgcgaaggcg
tttctagatgacttcgtaccgcttagctcaagccgtgttgaagagttgtatcatctactt
gatcagtttcccccaaacgtaccggatgaagaactgacaccagagctttatgcgcctgta
tttgcaaaagcacttgtgaatggttctctttatgtcgctagtttccctaaaacaaagaaa
aacgcgacaatatccagtgaaccaacaccggtacctaagcaagtaaaagcaaagtctaag
cagaacaaagcacatacatcttctaaaacccaagctaagaattcagcctctgcaaagcct
ttacagacgggcagcgaatgtcatgaaaaagcgggagatccggtttctctagtaacgggc
gaagaaatattaacactcaatgatgtagagcttcccaatggcttcgtttggtcaagaacg
tatcgctcatccaaagcttcccgaaatcaaggtcttggttacggttggcgacatgctttt
caatttgaactgaaagaagtcacagatgaaaagcacaacgtcacctcatgggaatttgta
agtgattctgctgacgagattgaatttgaaccagttgagcatggttcaacaagttatcaa
gtctatgtcggagcaagctgtcatttcctaaacccaaatacacgaattgtcactctctct
agtggtgatcaatatcgttttgagttggtagaagacatttggctattaaaacaaatccgc
aatggaatcttttcgacgttccaacttcgttattcgagaaaccatcgcctaattgaagtt
gcacatagcaagcgaccagttcttgagtgtcaatatgataaacaagggcgccttgttgaa
ttgttgaacgcaaagacagaacaagtattaacaacatatatctatgacgatcaagacgat
cttgttagtgcgaagaatgatttgggtttgactgagcgatatgagtatcaagaccaacat
ttgatagccaaacgtgtgcgaccaacagggtttacgcattactttgaatggtcgggagaa
ggctcgagtgctaagtgcattagaaactttggcgactcaggtatttacgattatcgattc
cattatgagggcgcaaagtcctcttattctgactctttagataatgagtggactttcatt
catgatgagcaaggtcatctgcttgaaaaatcgagcccgacaggaagaacgtggcaatgg
cactatgatcatttagggcgtaaagagaaagcggtattcccagataactcgacaacacag
taccagtacaatcagcaaggccaattaatttccaaactgcactcttccggtgctcaaatt
caatatggttatgacagcttaggtaagcttgtaaaaacggtatctcctgatggtgatctt
gaaaagggctattacaacagtcttggtcaacgagtgtgggatatcgatgctctaggttgc
gtaacggagtatgaatacgataaacatggtcaagtcgtaaagagagagtctgaagatggt
aagaagagccgttggtggtgggataaacaacaaagattagtcgctcatgaagtagatggc
actttacttcgttacagttatggcgctaccgatttagttaatgggattgcgtatcccgat
ggatgtgttgcccagatttcctatgatgattacggacgccgcacatcgataagatatttc
aacgacgaagaccaagtcggttacagtgaagagtacgcttatgacgagtttagtcgtgtt
gcacagatacacacaccagaaggtgtcacgtcttatcaatggggagctttggctcaacaa
gaagcggtaatcttccctgatggcagccatatttcctacgagtacgatcaacaacgtaac
ctaacgaaattagttcgaagtgatggtctagagtttgagtttttgtacgacagtgaaggt
ttactatcaggtacccttggatttgatgggctacacagccaattcaaatacgattctatg
ggaagaatcatccgaaaagatgttgcagataggaccgttttataccgctatgacgatgct
ggctttcttcagcatattaaagcgggaaatggaaaaaatattgtagagaatcactttaac
tatacgttaggtggaagactgactttagcctctaatcgtcatcaaacattgcaataccaa
tactcttcattcgggcatttaacaaagcgtattcaaggtcaatttgaaatcggtgaagag
tttaaccgagtcggacagcgtgtttcgcaaaccttacctgacaagacgtcacttaacttt
tcatacgacaccaatggtaggctttccgaaatccggtttagcgatgactcattaccgaaa
attgagttccaatatgatgttatggggaggctttctgtcactgaaactgcgagtttcaaa
gagagcaagctttatgacggtgtcggtcgattagtcgagcagcaatggtcaggtagagaa
aaaaaatacatatacaatgcacagaaccgaatctcttcaattttagataatactgcaggg
gcaactcactatcagtacgataccctcgggcacgttacaaaggttagtgaagccagttcg
acttcaacatttgaatcagatagctttggaaatcccgctttggctgattctaaggtaatg
agtgaccgcatcgaagcttatgcaggtgttcgttacaaatacgaccaacaaggtaatcaa
gttaaacgagaaggcgatggcacggttcaaaaacgtgtgtttgacgcattaaatcaactg
gtagaagtacatggtgattcgagtattagtcactatgaatatgatgcattaggccgtaga
acaaagaaaattactcaacatggtatcacggagtttctttgggaaggtgagcgtttactc
ggagaacgcactgccgatggctttcgttggtacttatatcaaccagaaacctacatccca
ttggctgtgttagaaaatggctcaatttatttgtatgaatgtgatcaggttggtaaaccg
gagcgactaaaagacagtgccggaaatatcgtttggagtgcaagttatgatgtccatgga
tttgcttctatagacgttgaagaggtgagaaatccacttcgctttcagggacagtatttc
gaccaagaaaccaacttacattacaacctcgctcggtattacgaccctaagctaggacgt
tttatccaacaagacccgatatctattgctggtggcattaaccattaccaatatgcaatc
aatcctatccagtggattgacccaacaggtttcctttgtgaagaagggctaaaacgttta
cagcaaatgctggctgattatcaggcgcaaaacaacgttccccaagaggtttgcgatcag
atcttagaggcggcaaaagagtcatccgtcggagaagatggcgttcgctcgcaagtcaaa
atccgaaaacccaaaggtaaaaatcatattcgatatgaatacgatttagaccatattgat
tgcgaaagaaacgagattactttttatcgtcatatcaatcattcagatggcagccgacac
gaagtgcagtatgttgttgggattgaggagtttgtcaatgcgcatgtttttgactcagag
aaagttggcggggaagaaggttgcacgatctttactgaagatcttgtgctaaataaagca
gagtataaagaaaactctgaactcaatacgagtgattatgagctaacagaaagaaacaaa
gcaaaaattgatgaatgcttgaaagagcgtcaagaggcaatggacgctcgatctggcgaa
gagggatataacgctcaaattggtaatattaaccaacagtctgcaaaaataggtgagttg
gccgcggatgactttgtccggagtaaacgtcctaatgctaagctgcttcatcccaaagat
attggaacctcaatttcgaagccgggcgactttgatatggtttacgaggtggaagatcca
ccaccaggtgaaattatcattgttgaggccaaaggggggagcagtcctttgggtagtaga
aaaataggaaacgaagcatgtcagcaaggaacggctaaatatgcagcggcaatagttggt
aagatgtctaggaatgggcgaaatacaacagagtgggaagcagctaaatcaataagaaac
gcttcgaggagtggacgcccaattagatatatacatactaaaaccccaatctctgaatca
gggagagtttcaaaggttaaagtaaaagaatttaatgtagatttagggaagttttaa
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