KEGG   Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_14880
Entry
M636_14880        CDS       T02760                                 
Name
(GenBank) transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:vpk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vpk03000]
    M636_14880
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpk02044]
    M636_14880
Transcription factors [BR:vpk03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    M636_14880
Secretion system [BR:vpk02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   M636_14880
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 HTH_50 GAF AAA_5 GAF_3 AAA_2 AAA_3 Sipho_Gp157
Other DBs
NCBI-ProteinID: AGQ98481
LinkDB
Position
I:1410234..1411865
AA seq 543 aa
MRSANHSELSNALLAISQSLADRSQLTQTLDAVLTAARQMTLAKHGIIYVLDQTGQALIP
STAHHNDKTVVSHPWEALQLDSASENDPFNFAIRNGEVVLINELYKYNGYDCESIYQTEQ
TLGLKSENLLAWPLIDSESKTIGLLVLLDLNVIDNEAALTEFCRMAASNIRQAVWLEQYG
QVIKNLNADNQALVRENTQLKKRTQKAYQGPIAESEEMLNVLNRLDKVLSLPVDVLLRGE
TGAGKEVIAKYIHENSNRSEQPLIVQNCAAIPEQLLESELFGHKKGSFTGADKDKVGLFE
AANGGTLFLDEIGDMPMLLQAKLLRVLQERKVRPIGTSKEIEVDVRVIAATHCNLMQQIK
DGGFRADLFYRLNVFPITLPPLRARKSDIIPLAEHFVQHTTNTLGLPQVPGLSANVRKQL
LAYPYPGNVRELKNIIERSVLLSDFETITHIEFGEQIPEDVPNIDMKAASPTPDQPAYER
QAQADLEDASKSLKDVVSQYERTVIIDCLNACNWHTKKAAEQLALPMSTLNHKMKKYDIS
AAG
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgcgttcagctaaccatagcgaacttagcaacgccctacttgcgatcagccaatctttg
gctgatcgcagccagcttacccaaacattggatgccgtgttgaccgctgcgagacaaatg
accttagcaaagcacggcatcatttatgttttggaccagacaggacaggcgttgattcca
agtaccgctcaccataacgataaaaccgtcgtttcccacccttgggaagcattacagcta
gactcagccagtgaaaacgacccatttaactttgcgattcgtaatggtgaagtggtgttg
attaacgagttatacaaatacaacggctacgactgcgaaagcatttatcaaacagagcag
acattgggactaaaaagcgagaacttactggcttggcctttgattgatagcgaaagcaaa
accattgggctgttagtcttactcgatttgaatgtcattgacaacgaggcagccttaact
gagttttgtcgaatggcagcgagtaacattcgtcaagccgtttggttagagcaatatggg
caagtgattaaaaatctcaatgccgacaatcaagccctagtgcgcgagaacactcagctc
aaaaaacgtactcagaaagcctatcaaggtcctattgcagagagcgaagaaatgctcaat
gtcttgaatcgtcttgataaggtgctatctcttcctgtcgacgttctgttgcgtggtgaa
acgggcgctggtaaagaggtgatcgcgaaatacattcacgaaaactctaaccgttcagaa
cagcctttgatcgttcaaaactgtgccgcaatcccagagcagttattggaatctgagctt
tttgggcataagaaaggttcatttacgggcgcggacaaagacaaagtcggtttgtttgaa
gcagccaacggcggtacgcttttcttggatgagattggcgatatgccaatgctactgcag
gcaaaattgctgcgtgtgctacaagaacgtaaagttcgcccaatcggcaccagcaaagag
attgaagtggacgttcgcgttatcgccgcaacccactgtaatcttatgcagcaaatcaaa
gatggcggattccgtgccgacttgttctatcgcttgaatgtcttccctattacattgccg
cccctgagagcccgtaagtcggacattattccccttgctgaacatttcgtgcaacacaca
accaacacgctaggtttaccgcaagtaccagggttaagtgccaacgtacgtaaacagctt
cttgcgtacccgtacccaggtaacgtgcgtgagcttaaaaacatcatcgaacgctcggta
ctactttccgattttgaaaccatcactcatatcgagtttggtgaacaaatcccagaagat
gtgccaaatatcgacatgaaagcagcctcacctaccccagaccaacctgcttacgagcgg
caggcacaagcggatttagaagacgcttcaaagagccttaaggacgtcgttagccaatac
gagcgtacagtgatcatcgattgcttaaatgcctgtaattggcacaccaagaaagccgcc
gagcaattggcgctgccaatgagtacacttaaccataaaatgaagaaatacgatatttct
gctgcgggttaa

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