Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_15725
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Entry
M636_15725 CDS
T02760
Name
(GenBank) 16S rRNA pseudouridylate synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpk03009
]
M636_15725
Enzymes [BR:
vpk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
M636_15725
Ribosome biogenesis [BR:
vpk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
M636_15725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AGQ98622
LinkDB
All DBs
Position
I:complement(1620784..1621485)
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AA seq
233 aa
AA seq
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MRLDKYLCDALGATRKQATKIIKSGEVLVDGEVQKSGSFKVPEGGVVEWDGREVGAPGPR
YIMLYKPADFVCSHEDGYNPTAFVLLDEPKVENLHFAGRLDVDTTGLVLITDDGQWSHRI
TSPKHKCEKTYRVWLADAIQPDYVEKFAQGIELRNEREATLPAHLEIVNEAENEVLLTIV
EGKYHQVKRMFAALGNKVELLHRERIGDIVLDDTLEPGDYRYLTQEEVDSVWN
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataagtatttgtgtgatgctctgggtgcgactcgcaagcaggcaacaaag
atcatcaaaagtggcgaagtgctcgtcgatggcgaagtacaaaaaagtggttcattcaaa
gtgccagaaggtggtgttgtggaatgggatggccgagaagtcggtgcgcctgggcctcgt
tacatcatgttgtacaaacctgcggattttgtttgttcacacgaagatggttacaaccct
acggcctttgtcttgcttgatgaacctaaagtcgaaaaccttcacttcgctggccgttta
gatgtggacacgacgggtttggtgttgattacagatgatggccaatggtctcaccgtatt
acatcaccgaaacacaaatgcgaaaaaacataccgcgtgtggctagcggatgcgattcaa
cctgattacgttgaaaagttcgcgcagggtattgagttgagaaatgaacgcgaagcgacg
ttaccggcgcaccttgagatcgtgaatgaagcagaaaacgaagtactgcttactatcgtt
gaaggtaagtaccaccaagtgaaacgcatgtttgctgcacttgggaacaaagtagaacta
cttcatcgtgagcgaatcggcgatatcgtgttggatgacactctagaaccgggtgattac
cgttatctgactcaagaagaagtggattctgtgtggaattaa
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