Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_16240
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Entry
M636_16240 CDS
T02760
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
M636_16240
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpk01007
]
M636_16240
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpk03016
]
M636_16240
Enzymes [BR:
vpk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
M636_16240
Amino acid related enzymes [BR:
vpk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
M636_16240
Transfer RNA biogenesis [BR:
vpk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
M636_16240
Prokaryotic type
M636_16240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TMF_TATA_bd
Spectrin
PCRF
FapA
Thump_like
DUF3086
ERM_helical
Exo84_C
Motif
Other DBs
NCBI-ProteinID:
AGR00188
LinkDB
All DBs
Position
I:complement(1727985..1729292)
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AA seq
435 aa
AA seq
DB search
MLDSKLLRTELDETAAKLARRGFKLDVETIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ
KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELEQVMAQLDEFTLSVPNIPADEVPDGKDEN
DNVEIYRWGEPKTYDFDLKDHVDLGEMGGGLDFASAVKITGARFIVMKGQFARLHRAIAQ
FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVNDEEPRKLSLI
PTAEVPVTNLVRDTITDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI
TKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE
ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI
PAVLQKYMGGATHIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctggattctaaattacttcgtacagagctggatgaaacagctgctaaactggcgcgt
cgtggctttaagctagacgtagagactattcgtaaacttgaagaacaacgtaagtccatt
caagtagaagtagaaaatttacaatccacgcgtaactccatctccaagcaaattggccaa
aaaatggcggctggcgataaagaaggcgcagaagagatcaagaaacaaatcggtactcta
ggtagcgatcttgacgcgaagaaagttgaacttgagcaagtaatggctcaactagacgaa
ttcacgctttctgtaccaaacatcccagcagatgaagtgccagatggcaaagacgaaaat
gacaacgttgaaatctatcgttggggtgagcctaagacttacgacttcgatttgaaagac
cacgttgacctaggcgaaatgggtggcggtctagacttcgcaagtgcagttaagatcact
ggcgcacgtttcatcgtgatgaaaggtcaatttgctcgtctacaccgtgcaattgctcag
ttcatgctagatcttcatacagaagaacatggctacacagagatgtacgtaccttaccta
gtgaactctgacagcctattcggtactggtcagcttcctaagttcggtaaagatcttttc
cacactgagcctctagcggaaaaagtaaacgacgaagagccacgtaaactgtctctaatc
cctacagcagaagtaccagtaacgaacctagttcgtgacactatcactgacgaagcggat
ctacctatcaagatgacagcacacacgccatgtttccgttcagaagcgggttcatacggt
cgtgatactcgtggtctgattcgtatgcaccagttcgacaaagttgagctagtacaaatc
acgaagccagaagattcaatgaacgcgctagaagagctaacaggtcacgctgagaaagtt
ctacaacttcttgaacttccttaccgtaaagtcgttctatgtacaggcgacatgggcttc
ggcgctcgtaaaacttacgacctagaagtttgggttcctgctcaagaaacttaccgtgaa
atctcttcatgttctaacatgtgggacttccaagctcgtcgtatgcaagcgcgtttccgt
cgtaaaggtgagaagaaacctgagcttgtacacacgctaaacggttctggtctagcagtt
ggtcgtaccatggttgctatcctagaaaacaaccaagaagcagacggtcgcattgcaatc
cctgcagtacttcagaagtacatgggcggcgcaacgcacatcggttaa
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