Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_16575
Help
Entry
M636_16575 CDS
T02760
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpk03032
]
M636_16575
03400 DNA repair and recombination proteins [BR:
vpk03400
]
M636_16575
Enzymes [BR:
vpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M636_16575
DNA replication proteins [BR:
vpk03032
]
Prokaryotic type
DNA Topoisomerases
M636_16575
DNA repair and recombination proteins [BR:
vpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M636_16575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AGQ98769
LinkDB
All DBs
Position
I:complement(1802179..1804809)
Genome browser
AA seq
876 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQSTGEKKAAAISTKGMSAE
EKARVKKEKDRKALIKKMGINPYHDWEANYQILPGKEKVVSELQKLAKDADCVYLATDLD
REGEAIAWHLREIIGGDEERYKRVVFNEITKNAIQQAFQTPGELNMDGVNAQQARRFMDR
VVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREINAFVPEEFWDIHANTKTKDKSD
FKLLVAQKDGVAFKPVNETETKAAISVLENASYEVCKREDRPTKSKPSAPYITSTLQQAA
STRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVDAVRDFIGSEFGDKYLPAKPL
TYGSKEGAQEAHEAIRPSDVSVKAEDLQGVDADAHKLYSLIWNQFVACQMTPAEYDSTTI
SVKAAEYTLKAKGRILKFDGWTRVQRPMGKNEDTILPAVQLGDKLSLESLDPKQHFTKPP
ARFTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVDQRRFYAEKMGEIVTDRLDDSF
NDLMNYDFTARMEQKLDQIAEGEVNWKAVLDNFFADFTGDLEKAELDESEGGMKLNHIVM
TDIECPTCGRPMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEEGIINVLEEDVETAA
LRAKKRCPICETAMDAYLIDDKRKMHVCGNNPNCEGYVVEYGEFKVKGYDGPVVECDKCG
SDMVLKNGRFGKYMDCTSETCKNTRKILKNGEVAPPKEDPVHFPELPCENSDAYFVLRDG
ASGLFMAASNFPKSRETRAPLVSELARFEERLPEKFKYLTTAPQEDPDGRPAVVRFSRKT
KENYVRSEDDGKPSGWTALYVDGKWEITDKRKKAKA
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactcgttatagtggagtctccagccaaggcaaagacgataaataagtac
cttggtaaggactttattgttaagtctagtgttggtcatgtgcgtgatctgcctacggcc
ggtcaaagcactggtgagaagaaagctgcagctatctcaacaaaagggatgagcgcagaa
gagaaagcgcgcgttaaaaaagaaaaagatcgcaaagcgctgatcaaaaaaatggggatt
aacccatatcatgactgggaagcgaactatcagattcttccgggtaaagaaaaagtcgta
agcgaactacaaaaattagccaaagatgctgattgcgtttatctcgcaaccgatttggac
cgcgagggggaagcaatcgcatggcaccttcgtgagatcatcggtggcgatgaagagcga
tacaaacgagtagtctttaacgaaattactaaaaatgctatccaacaagctttccagact
cctggcgagttaaatatggatggcgttaatgcgcagcaagctcgtcgattcatggaccgc
gttgtaggtttcatggtttctccattgttatggaagaaagtggcacgtggcctgtctgct
ggtcgtgttcaatctgtagcggtgaagctattggtggaacgtgagcgtgaaatcaacgca
tttgtgccagaagaattctgggatattcacgcaaataccaaaactaaagataagtcagat
tttaaactgctggttgcgcagaaagatggcgttgcgtttaagcctgttaacgaaacagaa
actaaggcagccatttctgtccttgaaaacgcaagctacgaagtgtgtaagcgcgaagac
cgcccgacgaagagcaagccttctgcgccatacatcacatcaacattgcagcaagcggca
agtacccgtctaggttacggcgttaagaaaaccatgatgttagctcagcgtctgtatgaa
gcgggttacatcacatatatgcgtaccgactcgactaacttgagtgcggaagcagttgat
gctgttcgtgacttcattggttcagaatttggtgacaagtatcttccagctaagccacta
acgtacggcagcaaagaaggtgctcaagaagcgcacgaagcgattcgtccatctgatgtg
tcagtgaaagcagaagacttgcaaggtgtagatgcggatgctcacaagctttactcactg
atctggaatcagttcgttgcgtgtcaaatgacacctgcagaatatgattcaaccacaatc
agcgtaaaagcggcggaatacacgctaaaagcgaaaggtcgtatccttaagtttgatggt
tggactcgcgtacagcgtccaatgggcaaaaacgaggacacaatccttcctgcggtacaa
cttggcgataagctaagcctagagtcacttgaccctaaacagcactttacaaagccacct
gcgcgctttacggaagcggcattggttaaagagttagaaaaacgaggcattggtcgtcct
tcgacttacgcatcgatcatttctactattcaagaccgtggctacgtaaaagtagatcag
cgccgattctacgctgaaaaaatgggtgaaattgttactgaccgtcttgatgacagtttc
aacgatttaatgaactacgactttactgcgcgtatggaacagaaactggaccaaatcgca
gaaggtgaagtgaactggaaagcagtactagacaacttctttgcggatttcactggtgac
ctagaaaaagccgagttagatgaatctgaaggtggtatgaagctaaaccacattgtgatg
acggatatcgagtgtccgacatgtggtcgccctatgggtattcgtaccgcttctacaggc
gtattcttaggctgttctggttacgcattgccacctaaagaacgttgtaagacaaccatt
aacttgggtgacgaagaaggtattatcaacgttttagaagaagacgttgaaacggctgct
cttcgtgcgaaaaaacgttgtccgatctgtgaaactgcgatggacgcgtacttgattgat
gacaagcgcaagatgcacgtttgtggtaacaacccgaactgtgaaggctatgttgttgag
tacggcgaattcaaagtgaaaggctacgatggccctgttgttgagtgtgacaagtgtggc
tcagacatggtgcttaagaacggccgctttggtaaatacatggattgtacgagtgaaact
tgtaagaacacccgtaaaatcctgaagaacggtgaagtagcgccacctaaagaagatcct
gtgcacttccctgaattgccatgtgaaaactcagatgcgtacttcgtgcttcgtgatggt
gcttctggcctatttatggcggcaagcaacttccctaaatcgcgtgaaacaagagcacct
ctagtctctgaactggcgcgttttgaagagcgtctaccagagaagtttaagtacctaaca
acggctcctcaagaggatccagatggtcgcccagcagtggttcgctttagccgtaagacg
aaagagaactatgttcgttcagaagacgacggtaaaccaagtggttggactgcactttac
gttgatggtaagtgggaaatcactgataaacgtaaaaaagcgaaagcttaa
DBGET
integrated database retrieval system
