Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_18345
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Entry
M636_18345 CDS
T02760
Name
(GenBank) LOG family protein ygdH
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00230
Purine metabolism
vpk00240
Pyrimidine metabolism
vpk01100
Metabolic pathways
vpk01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
M636_18345
00240 Pyrimidine metabolism
M636_18345
Enzymes [BR:
vpk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
M636_18345
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Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Glycos_transf_2
Motif
Other DBs
NCBI-ProteinID:
AGQ99026
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Position
I:2172717..2174078
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AA seq
453 aa
AA seq
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MITHISPAGSMDLLSQLEVERLKKTASSDLYQLYRNCTLAVLNSGSHTDNSKELLDKHQS
FDVNVVRRERGIKLELTDPPEHAFVDGEIIKGIQEHLFSVLRDIVYVNMHLADSQRLNLT
NPTHITNLVFGILRNAGALTPGIEPNLVVCWGGHSINGVEYQYTREVGNELGLRELNICT
GCGPGAMEGPMKGAAIGHAKQRYTEQRYLGLTEPSIIAAEPPNPIVNELIIMPDIEKRLE
AFVRMAHGIVIFPGGPGTAEELLYILGIMMHPDNADQPMPIVLTGPKESEEYFRSIDAFI
RDTLGEEGQKHYQIVIDDPAEVARIMKRSMEDVRLHRKEKGDAYSFNWSLKIEPDFQLPF
DPTHTSMEGLNLNLDQEPQVLAANLRKAFSGIVAGNVKAEGIREIECKGPFSIHGDPVLM
KKLDKLLQDFVEQHRMKLPGGSDYEPCYRIAHS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgattacccatataagccccgcaggtagcatggacttgctatcccaactggaagttgaa
cgcttaaagaaaaccgcttcgagtgatctttaccagctttatcgtaactgtacgttagcg
gtattgaactctggtagccacacagataactccaaagagcttctcgataaacaccaatcg
tttgatgtgaatgtagtgcgccgcgaacgtggcattaagctagagctgaccgacccacca
gagcatgcgtttgtcgatggagagatcattaaaggcattcaagaacacttattctctgta
ctgcgtgacatcgtttacgtgaacatgcacttggctgacagccagcgcctaaatctcact
aacccaacgcacattaccaaccttgtgtttggtattttgcgtaacgcaggcgcgctcact
cccggtattgaaccaaatctcgtcgtctgttggggcggccattcaatcaatggcgttgaa
taccaatacacgcgcgaagtgggtaacgagcttggcttacgtgaacttaatatctgtacg
ggttgtggaccaggtgcgatggaaggcccgatgaaaggagcggcaatcggtcacgctaaa
cagcgttacaccgagcaacgctaccttggcttgacggagccttcaatcattgccgctgag
ccgccaaacccaatcgttaacgagctgatcatcatgccggacatcgaaaaacgtttagaa
gcgtttgttcgtatggcgcatggtattgtgatcttcccgggtggtccgggtactgccgaa
gagttgctgtacattcttggtatcatgatgcatccagacaatgctgatcagccgatgccg
attgtgttaaccggaccaaaagagagcgaagaatacttccgttctatcgacgcgtttatt
cgcgataccttaggtgaagaaggtcaaaaacactaccaaatcgtcattgatgatcctgcc
gaagttgcacgtatcatgaagcgctcgatggaagatgtacgccttcaccgtaaagaaaaa
ggcgatgcttacagcttcaactggtcattgaaaatcgaaccggatttccaactgccattt
gacccaacgcatacatcaatggaagggttgaatttgaacttagatcaagaacctcaagtt
ctggcggctaacttacgcaaagccttctctggtattgtggcaggtaacgtcaaagccgag
ggcattcgcgaaatcgaatgcaaaggtccattttccattcatggcgatcctgtactgatg
aagaagctcgacaagctactgcaagacttcgttgaacagcatcgaatgaaattgccaggc
ggttcagattacgaaccatgctatcgaattgcccattcataa
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