Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_18590
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Entry
M636_18590 CDS
T02760
Name
(GenBank) recombinase
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpk03400
]
M636_18590
DNA repair and recombination proteins [BR:
vpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M636_18590
TLS (translesion DNA synthesis) factors
Other SOS response factors
M636_18590
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_15
DUF4335
AAA_22
ACF4_like
CcmH
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AGQ99069
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All DBs
Position
I:2225747..2227411
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AA seq
554 aa
AA seq
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MLAHLSVNNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRADAGMVRQGEE
KTEVSAAFLLDNNLHATRWLEDNDLLDGTECILRRIITKEGRSRAFINGSPVPLSQLKSL
GQLLINIHGQHAHHQLMKSEYQMAMLDQYAGHLNLLKSTRSAYQHWRQADNNLKQLKENS
QQNQAQKQLLEYQIKELNELSLGEEEFAELEQEHKRLSNSGELAATCQQALELIYEGEEV
NALGILQSANHSLIQLAELDEKLAELPNMLADAMIQLEETKNELRSYLDGIDVDPGRMAY
VEERFSKVMSMARKHHVMPDELYQHHQDLLAQIEALDCSDERLDELAQEVEQKYQSFLTQ
AEKLHKSRSRYAKELNKLITQSMHELSMEKAVFSIEVNNENTHPSPLGMDSVCFLVSTNP
GQPLQPIAKVASGGELSRISLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKMLRKL
GESTQVMCVTHLPQVAGCGHQQMFVAKHTKGGQTETQMRALDEEQRVAELARLLGGSQIT
DSTLANAKELLIAA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgctggctcatctaagtgttaataattttgcgattgttaagtctttacaactcgagctt
tctaagggcatgaccaccattacaggtgaaacaggcgctggtaaatctattgcgattgat
gcgttaggtctgtgcctaggcggacgtgccgatgcaggtatggtgcgtcaaggtgaagag
aaaaccgaagtcagtgccgcctttttactggacaacaacctacatgcaacgcgttggcta
gaagataacgatctgctggatggcactgaatgtatcttgcgtcgcatcataactaaagaa
ggccgttcaagagccttcatcaacggcagcccagtaccactttcacaattaaaatctctt
gggcagctgttaatcaacatccatggacaacacgcgcatcaccaactgatgaaaagcgaa
taccaaatggcgatgttggatcaatatgccggacacttaaatctattaaagagtacacgc
agtgcgtaccaacattggcgtcaggcagacaataacctcaagcaactcaaggaaaacagc
cagcagaatcaggcgcaaaaacagttgcttgaataccaaatcaaagaactgaatgagcta
tcgctaggtgaagaagaattcgcagaactcgagcaagagcacaaacgactgtccaatagc
ggtgaactcgccgctacctgtcagcaagccctcgaacttatttacgaaggtgaagaagtc
aatgcgcttggtattttgcaatcggccaatcactccctaattcaattagcggaattagat
gaaaaattagccgagctaccaaatatgctggctgacgcgatgatccagctagaagaaacc
aaaaacgaacttcgtagctacttggatggcatcgatgttgacccaggtcgtatggcttat
gtcgaagagcgtttttctaaagtgatgtcgatggctcgtaagcatcatgttatgcctgat
gagttataccaacatcaccaagaccttctagcacaaatcgaagcattggattgctctgat
gaacgtctggatgaattggctcaagaagtggaacagaaataccaaagcttcctgactcaa
gcggaaaagctgcataaatcacgcagccgttacgcaaaagaactgaacaagctgatcacg
caaagcatgcacgaactgagcatggaaaaagccgtcttcagcattgaagtaaacaacgaa
aacacacatccgtcgccactgggtatggacagtgtgtgcttcttggtttccactaacccg
ggtcaacctttacaaccaattgcgaaagttgcgtcaggtggtgagttatcccgaatctcg
ctagcgatccaagtgatcactgctcaaaaagtagatacgccaagtttgatcttcgatgag
gtggacgtgggtattagtggcccaacagctgcggtagtaggcaaaatgctacgcaagctt
ggagaatcgactcaagtcatgtgtgtcacacacttaccgcaagtagccggttgtggccac
caacaaatgtttgtcgcaaaacacaccaaaggtggtcaaacggaaacacaaatgcgcgca
ctagatgaagaacaacgtgtggcagaactggctcgtttactcggtggtagccaaatcact
gattcaacattagctaacgcgaaagaactccttatcgccgcctaa
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