Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_19305
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Entry
M636_19305 CDS
T02760
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpk03009
]
M636_19305
Enzymes [BR:
vpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M636_19305
Ribosome biogenesis [BR:
vpk03009
]
Prokaryotic type
rRNA helicases
M636_19305
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_C_2
AAA_11
AAA_30
AAA_22
AtuA_ferredoxin
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AGQ99193
LinkDB
All DBs
Position
I:2383069..2384292
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AA seq
407 aa
AA seq
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MIRTFAELDLDQNLLEAIEEMGYERPTKIQAEAIPQALDGRDILASAPTGTGKTAAFVLP
ALQYLQDFPRRKPGPARILILTPTRELAMQVADQARALAKNTKLNIFTITGGVQYQEHAD
ILATTQDIVVATPGRLREYIDAERFDCRAIEWLVLDEADRMLDMGFAPTVDRLSNECRWR
KQTLLFSATLEGKGVEGFTADLLNEPAEIDAKSPLRERKKIAQWYHRADSAEHKLALLKH
IITEQAERTIVFLKTRERLAELRAQLESAQIPCSWIQGEMPQDRRNNAIARFRDGTVNVL
LATDVAARGIDLPDVSHVINYDMPRTADVYLHRIGRTARAGKKGNAISIVEAHDQPMMDR
VARYVKEDIKERFIKEMRPKHKKPVFKKKKKKEDKKKTAKKKTAKKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagaacctttgctgaacttgatctagaccaaaacctacttgaagccattgaagag
atgggctacgaacgcccaactaaaattcaggcagaagcgattccacaagcgttggatggt
cgtgacattctagcgtcagcgccaacgggtactggtaaaacggcagccttcgttctgcca
gcattgcaatacttgcaagatttccctcgtcgtaaacctgggcctgcgcgtattttgatc
cttacgccaactcgcgaactagctatgcaggttgccgaccaagctcgtgctttggcaaag
aacactaagctgaacatcttcacgatcacaggcggcgttcaataccaagaacacgcagac
atcctagcaactacgcaagacattgtagttgcaacaccaggccgtctacgtgagtacatt
gatgcagaacgttttgattgtcgtgctatcgaatggctggttctcgatgaagcagaccgc
atgctggacatgggctttgctccaacagttgaccgtctgtcgaatgaatgtcgctggcgt
aagcaaacccttctgttttcagcaacattagaaggaaaaggcgtagaaggcttcacagct
gacctactgaacgagccagcagagatcgacgcaaaatcgccactgcgtgagcgtaagaag
attgctcaatggtatcaccgtgctgatagcgcagaacacaaactggctctgctgaaacat
atcatcacagagcaagctgagcgcactatcgtgttcttaaaaactcgtgaacgcttggca
gagctacgtgcacaacttgagagcgcacaaatcccgtgttcgtggattcaaggtgaaatg
cctcaagatcgtcgtaataatgccattgcacgtttccgtgacggtactgtgaacgtgcta
ctagcaacagacgttgcggcgcgtggtatcgaccttcctgatgtttctcacgttatcaac
tacgacatgccgcgcacggctgacgtataccttcaccgtatcggccgtacagctcgtgca
ggtaagaaaggtaacgcaatctcaatcgtagaagcgcacgaccagccaatgatggatcgc
gtagcacgttacgtgaaagaagacatcaaagagcgtttcattaaagagatgcgccctaag
cacaagaaacctgtgtttaagaagaaaaagaaaaaagaagacaagaagaaaacagcgaaa
aagaaaaccgctaagaagaagtaa
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