Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_19465
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Entry
M636_19465 CDS
T02760
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00220
Arginine biosynthesis
vpk00240
Pyrimidine metabolism
vpk00250
Alanine, aspartate and glutamate metabolism
vpk01100
Metabolic pathways
vpk01110
Biosynthesis of secondary metabolites
vpk01240
Biosynthesis of cofactors
Module
vpk_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
M636_19465 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
M636_19465 (carB)
00220 Arginine biosynthesis
M636_19465 (carB)
Enzymes [BR:
vpk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
M636_19465 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
Epimerase
GSH-S_ATP
Motif
Other DBs
NCBI-ProteinID:
AGQ99216
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Position
I:complement(2425254..2428487)
Genome browser
AA seq
1077 aa
AA seq
DB search
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYKVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFDEMVDLDAPDA
LTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEEQVKAGG
FAGLTEEVLRQMKRKGFSDARLSKLLGVAESEIRRLRDQFDIHPVYKRVDTCAAEFSSDT
AYMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQAAVERLGLLQPQNATVTAMEQAVEKSREIGFPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNTQFAVKDNEVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSVREGDKQRVVDLA
SKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNNEYTYIVNTAAGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFATCMSHTADAKASVTSVQELHAKVKASLEA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacattcaaagtattctaattcttggtgctggtccgattgttatc
ggtcaggcatgtgagtttgactactctggcgcacaagcgtgtaaagctcttcgtgaagaa
ggctaccgagttattctagttaactctaacccagcaaccatcatgacagaccctgaaatg
gcagatgcaacttacatcgagccgattcaatgggaagttgttcgcaagatcattgagaaa
gaacgcccagatgcagtattgccaacaatgggtggtcagacggcgcttaactgtgcgcta
gatctagagaagcacggcgttcttgctgaattcggcgtagagatgattggcgcaacggct
gacgcgattgataaagcagaagaccgttctcgcttcgataaagcaatgaagtctatcggc
cttgagtgtcctcgtgctgataccgcgaagacgatggaagaagcttacaaagttttagac
atggttggcttcccttgtatcatccgtccatcgttcaccatgggtggtacgggtggcggt
atcgcgtacaacaaagaagagtttgaagaaatctgtcgtcgtggtctggatctttctccg
actaacgaacttcttatcgatgaatcgctaatcggttggaaagagtacgaaatggaagta
gttcgcgacaaagcggacaactgtatcatcgtatgttcaatcgaaaacttcgacccaatg
ggcatccacaccggtgactcaatcacggttgctccagcgcaaactctgactgacaaagaa
taccagctaatgcgtaatgcatcgctagcggttctgcgtgaaatcggtgttgagacaggt
ggttcaaacgtacagtttggtatcaacccgaaagatggccgtatggttatcatcgagatg
aacccacgtgtatctcgctcttctgctctggcatcaaaagcaacaggtttcccaatcgct
aagattgcggcgaaactggctgttggctttactctagacgagctgcaaaacgacattaca
ggtggtgcaactccggcatcattcgaacctactatcgactacgtagtgaccaagattcct
cgttttaacttcgagaaatttgctggcgctaacgatcgcctgacgactcagatgaagtca
gttggtgaggtaatggcgattggtcgtaaccaacaagaatctcttcacaaagcattacgt
ggcctagaggttggcgcgactggctttgatgagatggttgacctagatgcacctgacgca
ttaactaagattcgtcacgaactaaaagaagctggcgcagagcgtatctggtatatcgca
gatgcatttcgtgcgggcatgtcagtggatggcgtgtttaacctgacgaacattgatcgc
tggttcctagttcaaattgaagagctagttaaactagaagagcaagtgaaagccggtggc
tttgctggtctaacagaagaagttctacgccagatgaaacgtaaaggtttctctgatgcg
cgcctatctaaactgttaggtgtggctgaaagcgaaatccgtcgtctacgtgaccagttt
gacatccaccctgtctacaagcgtgtggatacgtgtgcggcagagttctcttctgatacg
gcttacatgtactcatcttacgatgaagagtgtgaagcaaacccaacagataaagacaag
atcatggtactgggcggtggtccaaaccgtatcggtcaaggtatcgaattcgactactgt
tgtgtacatgcatcactagcgcttcgtgaagatggctacgaaaccattatggtgaactgt
aacccagaaacagtatcgacagactacgatacatctgaccgtctttacttcgaaccagta
actcttgaagatgtgttgtctatcgcccgcgttgaaaagccaaaaggtgtgattgttcaa
tacggtggtcaaacgccacttaaactggctcgcgcactagaagctgcaggcgtgccaatc
atcggtacaagcccagatgcgattgaccgcgcagaagaccgtgagcgtttccaggctgca
gttgagcgtttaggtcttctacaaccacaaaacgcaacagtaacggcgatggagcaagcg
gttgagaaatctcgtgaaatcggcttcccactcgttgttcgtccatcttacgttttgggt
ggtcgtgcgatggaaatcgtctacgatgaacaagacttgcgtcgttacttcaacgaagca
gtaagcgtatcgaatgaatctccagttctactagaccgattcctagatgatgcaacagaa
gtggatatcgacgctatctgtgacggtgagcgcgtggttatcggcggcatcatggagcac
attgagcaagcgggcgttcactctggtgactctgcatgttcgcttcctgcttatacacta
agccaagaaatccaagacaagatgcgtgagcaagttgagaagctggcgttcgaacttggt
gtacgtggcctgatgaacactcagttcgcagtaaaagacaacgaagtttacctaattgaa
gtaaaccctcgtgctgcgcgtacggtaccattcgtatcgaaagcgacaggcgcaccacta
gcgaaaatcgcggcacgtgtaatggcgggtcaatctctggaatcacaaggtttcactaaa
gagattattcctccttactactcagtcaaagaagtcgttctacctttcaataagttccct
ggcgttgaccctctattgggtcctgaaatgcgctcaacaggtgaagtgatgggtgttggt
gcaacgtttgcagaagcttacgcaaaagcagagcttggctgtggcagtgtgtaccctgaa
ggtggtcgtgcgctactttctgttcgtgaaggtgataagcagcgtgttgttgaccttgcg
tctaagctagtaaaattgggttaccaattggatgcgactcacggtactgctgtaatcctt
ggtgaagcgggtattaaccctcgcctggtaaacaaagtacatgaaggtcgtccacacatt
cttgaccgcatcaagaacaacgaatacacctacattgtgaacacggctgcaggtcgtcaa
gctattgaagattcgaaagttctacgccgcggtgctctagcagagaaagtgaactacaca
acaacgctaaacgctgcgtttgcaacgtgtatgtctcacactgctgatgcaaaagcgtca
gtaacttctgttcaggagctacacgctaaagtaaaagcgagtctggaagcgtaa
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