KEGG   Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_19725
Entry
M636_19725        CDS       T02760                                 
Name
(GenBank) general secretion pathway protein A
  KO
K02450  general secretion pathway protein A
Organism
vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:vpk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpk02044]
    M636_19725
Secretion system [BR:vpk02044]
 Type II secretion system
  General secretion pathway protein
   M636_19725
SSDB
Motif
Pfam: GspA_C39-like AAA_22 AAA_16 PG_binding_1 AAA_30 AAA_19 TniB AAA SLFN-g3_helicase AAA_5 TsaE ABC_tran AAA_14 AAA_7 ResIII DEAD TrwB_AAD_bind PIF1 cobW NB-ARC AAA_18 PG_binding_3 NTPase_1 Sigma54_activat COX4 nSTAND3 AAA_11 AAA_25 NPHP3_N NACHT AAA_24
Other DBs
NCBI-ProteinID: AGQ99265
LinkDB
Position
I:complement(2488151..2489770)
AA seq 539 aa
MYKDFFGFVEQPFSIVPNSRYLYLSQRHKEAITHLNAGLGDGGGFAMLTGEVGTGKTTVA
KAMLANLDESTKAGLILNPTFSSRDLLEAICDEFKISYPQDATLKQLNQVIHHYLLRNHK
VGWQTLLVIDEAQHLAADVLEQLRLLTNLETDTRKLLKVLLVGQPELQRLLQTTQLRQLA
QRITGRYHLLPLDEKETADYIAFRLHTAGGDQQLFHRSSSKLIAKYSHGIPRLINLICDK
ALNMSYHQGSVVVDKQTVQQACEEVMQFQADIYQQDKPRQSFTWPAWGSAAIGVMAAVGV
GWAAINYMPMKPKAPMSEVPVAASSSTPAPLMASEQLTDAQRDMLLAQKQSNLAVNDLYR
LWGYRASVRDNLCLSEPQSTMRCERKMATWPLLMQQNRPVILELNYQGDVGYVILYAVGN
DQVEVLNGKQRLRLPVSWLKPMWQGNIIELWQAPLKETLRLDMEGPAIEVLDQLLAKAVS
ESPLETSIFDGALKERVELFQRWQGIGVDGIAGHRTLERLQQSVQPNAPTLASINKEEV
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgtataaggacttttttgggtttgttgaacagccgttttcgattgttccaaactcacgt
tatttgtatttaagccaacgtcataaagaagcgatcacgcacctcaatgcgggattgggc
gacggcggtggttttgccatgctgaccggtgaggtaggaacaggcaaaacgacagtggcc
aaagccatgctcgcgaatttagatgaaagcaccaaagcggggctgattctcaatccgact
ttttcgagccgagatctgctagaagcgatttgcgatgaatttaaaatctcttatccgcag
gatgcgacgttaaaacagctaaaccaagtcatacatcattatttgctgcgtaaccacaag
gtgggttggcagacgttgctcgtcattgatgaggctcagcatcttgctgccgatgtactt
gagcaactgcgcttgttaacgaacttagaaaccgataccagaaagctgcttaaagtgctg
ttggtagggcagccagagttacaacgcttgttacagactacgcagttgcgtcagctcgca
cagcgtatcactggccgttatcatctgttacctcttgatgagaaagagactgcggattac
atcgcgtttcgtttgcacacggctggtggcgatcagcaactgtttcatcgcagttccagt
aagttgattgcgaagtatagccatggcattccgcgtctcatcaacctgatttgtgataaa
gcattgaatatgagttatcaccagggcagtgtcgttgtcgataaacagacagtgcaacaa
gcctgcgaagaagtcatgcagtttcaggcggacatttaccagcaagataaacctcgtcaa
tcatttacatggccagcgtggggatcggctgctattggtgtaatggcagcggttggcgtc
ggctgggctgcaataaattacatgccaatgaagccaaaggctccgatgtcggaagtcccc
gttgctgcgtcttcgtctactcccgctcctcttatggcaagtgagcagctaactgatgcg
cagcgcgatatgctgttggcgcagaaacaatccaatcttgccgtgaatgatctttaccgc
ctttggggatatcgagcatcagtgcgcgataatctttgcttgtctgagcctcaatccacc
atgcgttgtgaaagaaaaatggcaacgtggcccttgctgatgcagcaaaatcgaccggtt
attttagagctgaattatcaaggcgatgttggttacgtgattttgtatgcggttggcaac
gaccaagtagaagtgctcaatggcaaacagcgcctgcgtttgcctgtttcgtggctgaaa
ccaatgtggcagggcaatatcattgaattgtggcaagcgccgcttaaagagacgttgcgt
ttagatatggaagggccggcgatagaagtgcttgaccaattgcttgcaaaagcggtgagt
gaatcaccactagaaacgtccatttttgacggtgcgttaaaagaacgagtggaactgttc
caacgttggcagggcatcggtgtggatggcattgcgggtcatcgcacgttagagcgctta
caacaaagtgtgcaacctaatgcgccaacactagcaagcattaacaaggaggaggtgtaa

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