Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_20295
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Entry
M636_20295 CDS
T02760
Symbol
cpdB
Name
(GenBank) 3'-nucleotidase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00230
Purine metabolism
vpk00240
Pyrimidine metabolism
vpk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
M636_20295 (cpdB)
00240 Pyrimidine metabolism
M636_20295 (cpdB)
Enzymes [BR:
vpk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
M636_20295 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
M636_20295 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
DUF4649
Motif
Other DBs
NCBI-ProteinID:
AGQ99349
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All DBs
Position
I:2615885..2617846
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AA seq
653 aa
AA seq
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MKMAVNPISVAVLSSMLTLAGPAMADTIKLRIIETTDIHTNVMDYDYYKDQPSQQIGLSR
AATLVKQAKSEVENSVLVDNGDLIQGSPMGDYMAAKGIQAGEVHPVYKAMNQLHYDVGNI
GNHEFNYGLDFLQNTLAGANFPYINANVFDKKTGEHYFQPYLIKTHSFKDTDGEIHQVKV
GYIGFVPPQIMVWDKKNLEGNVVAKDIKETAEKLIPQMKKEGADIIVAIPHSGVSTDPYK
LGAENSVYYLTQVKGIDAIAFGHSHAVFPGKGFENLQGVDNNKGTINGVTAVMPGRWGSH
VGVMDLVIEQKDGQWQVVEGQSEARPIFDKATKKSLAEADQGIIRALEDDHKGTREFVNQ
PIGKANDVMYSFLALVQDDPTIQIVNLAQKDYVERFIQGDPDLADIPVLSAAAPFKVGGR
KDDPNGFTEVESGQLTFRNAADLYLYPNTLVAMKVKGKEVHEWLECSAGQFKHIDVNTTQ
PQSLIDWDNFRTYNFDVIDGVEYQIDITQPPKYDASCKVINPDSQRIVNLTFNGKPVDPK
QDFIIATNNYRAYSNTFPGTGPDFIAFDSPDENRSVVAAYISRVSEEKGEVTPSADNNWS
FAPIKSDKKLDIRFETSPSEKASKFIQDKGQYPMKRVATDEVGFAIYQIDLNK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcagttaatcctatttccgtcgcagttttgagtagcatgttgacgcttgca
gggccagcaatggcagacacaatcaagcttcgcattattgaaaccactgacatccacacc
aacgtgatggattacgattactacaaagaccaaccatcacaacaaattggtttgagccgc
gcagccacattagttaagcaggcaaaatccgaagtggaaaacagcgtgttggtcgacaac
ggcgacttaattcaaggtagcccgatgggtgactacatggcagcaaaaggaatacaggct
ggagaagttcatcctgtgtacaaagccatgaaccaattgcactatgatgtggggaacatt
ggtaaccatgaattcaactacggtttggacttcttacaaaatacgctggccggcgcgaac
ttcccctacatcaacgccaatgtgtttgataagaaaactggcgagcattacttccaaccc
tacctgatcaaaacacacagttttaaagataccgatggcgaaattcatcaagtaaaagtg
ggttacatcgggtttgttccaccgcaaatcatggtttgggataagaaaaatcttgaaggc
aacgtcgttgccaaagacatcaaagaaactgcagagaagctgattccgcagatgaagaag
gaaggtgcggacattattgtcgcgattccgcattcaggggtttcaaccgatccatataaa
ctaggtgcggagaactcggtgtactatttaacgcaagtaaaaggcattgatgccattgcg
tttggtcactctcacgcggtcttcccaggcaaaggatttgagaatctacaaggcgtagac
aacaacaaaggcaccatcaacggtgtcactgccgtcatgcctggccgttggggtagccac
gtgggagtcatggatctggtcatcgagcaaaaagacggccaatggcaagtagtggaagga
caatctgaagctcgaccaattttcgacaaagcgactaagaaatcgcttgcagaagcagac
caaggcatcattagagcactcgaagacgatcacaaaggcactcgcgaattcgttaaccaa
ccaattggtaaagcgaatgacgtgatgtacagcttcttggctttggtgcaagatgaccca
acaatccaaatcgttaaccttgcacaaaaagactacgtggaacgtttcattcaaggcgat
ccagaccttgctgacattccagttttgagcgcggcagcgccgtttaaagtgggcggacgt
aaagatgatccgaacggcttcactgaggttgaatctggccaactgactttccgcaacgcc
gccgacttgtacctatacccaaatacgctcgtcgcaatgaaggtgaaaggcaaagaagta
catgaatggctagagtgcagcgcaggccaattcaagcacattgatgtcaatacgactcag
ccacaatcgttaattgattgggataacttccgtacgtacaactttgacgtgattgatggt
gtggaataccaaatcgacatcactcaaccaccgaagtacgacgcgagttgtaaagtcatt
aatccggactcccagcgtatcgtgaatctgactttcaatggcaaaccagttgatccgaaa
caagatttcatcattgcgactaacaattaccgcgcgtacagcaataccttccctggcacg
ggtccggacttcattgcatttgactctccagacgaaaaccgttctgtggttgctgcgtac
atttctcgcgtcagtgaggaaaaaggcgaagtcacgccaagcgctgacaataactggtcg
ttcgcaccaattaagtcagacaaaaaactggatattcgctttgaaacctcaccgagcgaa
aaagcttcgaagtttatccaagacaaaggccaatacccgatgaaacgcgtcgcaactgac
gaagtgggctttgcgatttatcagatcgatttaaacaaataa
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