Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_20305
Help
Entry
M636_20305 CDS
T02760
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpk03009
]
M636_20305
Enzymes [BR:
vpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
M636_20305
Ribosome biogenesis [BR:
vpk03009
]
Prokaryotic type
rRNA helicases
M636_20305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Helicase_C_2
AAA_30
AAA_22
adh_short
PRAI
SLED
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
AGQ99351
LinkDB
All DBs
Position
I:complement(2618586..2619965)
Genome browser
AA seq
459 aa
AA seq
DB search
MSKQTFDQVGLNPALLETLDSLNYTHMTPIQALSLPAILNQRDVIGQGKTGSGKTAAFGL
GVLSNLNVKRFRVQALVLCPTRELADQVAKEIRTLGRGIHNIKVLTLCGGMPMGPQIGSL
EHGAHILVGTPGRILDHLEKGRINLEELNTLVLDEADRMLEMGFQDALDAIINAAPKQRQ
TLLFSATFPEKIEKIAQRIMKSPEMIKVESTHDTSSIAQYFYKVEGTEARDEALANLLLT
YQPESAVVFCNTKKEVQNVADELHHRGFSVIDIHGDLEQRERDQALVQFANKSVSILVAT
DVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGLAFSFFGEKDGLRVARIEE
YLEMDVVPATLPAKSNQQPYQAKMVTINIDGGKKQKVRPGDILGCLTGKNGIPGAQVGKI
HLFPVRSYVAVEKSAAKKALQIISTGKMKGRQFRARLLK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaacaaacttttgaccaagtaggcctgaacccagcgctactagaaacgctggat
tcattgaactacacccatatgacgccaattcaagcgttaagcttaccggcgattttgaat
cagcgtgacgtaattggtcagggtaaaacgggctcgggtaaaacagcggcgtttggtctt
ggcgtgctatcaaatctaaacgtaaaacgatttcgcgtgcaggctttggtgctgtgtccg
actcgcgaactggcggatcaagttgctaaagaaattcgaacgctagggcgtggtatccat
aacattaaagtgcttacgttgtgtggcggtatgccgatgggaccgcaaattggttcgtta
gagcatggtgcacatatccttgttggtactccggggcgtattctggatcaccttgagaaa
ggccgtattaacttggaagagttgaatacactggtgctggatgaagccgatcgtatgcta
gaaatgggcttccaagacgctttagatgcaattattaatgcggcgcctaaacagcgtcag
acattgctgtttagcgccacattcccagagaagatcgagaaaatcgctcagcgtattatg
aaatcgccagagatgatcaaggttgaatcgactcacgatacttccagcattgctcaatac
ttctacaaagtagaaggaactgaagcgcgtgatgaggcgctagccaatcttcttttgact
taccaaccagagtcggcggtggtgttctgtaatacgaagaaagaagtgcaaaatgtcgcg
gatgaattacaccatcgcggctttagcgtgatcgatattcacggtgatcttgaacagcgt
gaacgtgatcaagcactggtgcaatttgcgaacaagagcgtttctattcttgtggcaacg
gacgtggcggcacgaggtttggatgtggacaatcttgatgctgtgttcaactttgagctg
tctcgtgacccagaagtgcacgtgcaccgtattggccgtactggccgagcaggcagtaaa
ggtttggcgttcagcttctttggtgaaaaagacggtctacgtgttgctcgtatcgaagag
tacttagagatggatgtggtacccgcgaccttgccagcgaaatcaaatcagcagccatac
caagcgaagatggtgaccatcaacattgatggcggcaagaagcaaaaagttcgtcctggc
gatattcttggttgtttgactggcaaaaatggcatcccaggtgcgcaagtgggcaagatt
catttgttccctgtacgttcttacgttgctgtagaaaagtctgccgcgaagaaagcattg
caaattatcagtacgggtaagatgaaagggcgtcagttccgagcgcgtcttcttaaataa
DBGET
integrated database retrieval system
