Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_21260
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Entry
M636_21260 CDS
T02760
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk03030
DNA replication
vpk03410
Base excision repair
vpk03420
Nucleotide excision repair
vpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M636_21260
03410 Base excision repair
M636_21260
03420 Nucleotide excision repair
M636_21260
03440 Homologous recombination
M636_21260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpk03032
]
M636_21260
03400 DNA repair and recombination proteins [BR:
vpk03400
]
M636_21260
Enzymes [BR:
vpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M636_21260
DNA replication proteins [BR:
vpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M636_21260
DNA repair and recombination proteins [BR:
vpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M636_21260
NER (nucleotide excision repair)
GGR (global genome repair) factors
M636_21260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGQ99494
LinkDB
All DBs
Position
I:complement(2799010..2801802)
Genome browser
AA seq
930 aa
AA seq
DB search
MASIPENPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVVNMLRSMMRQFASERIAV
VFDAKGKTFRDEMYSEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICVPGVEADDVIGT
LAYQASQQGMPVLISTGDKDMAQLVDDNITLINTMTNVVMDREGVVEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGLTKLYENLDDIAALGFRGSKTMAKKLVDNK
DNAMLSYELATIKLDVELEETPESLLKAEPNKDELIKLYGQLTFKSWLNELLEGGSGTVE
AVELAGSAQASSSSSHAEMETSAVTIDRSQYETILDEASFNAWLEKLKAAELFAFDTETD
SLDYMVANLVGLSFAIDEGMAAYVPVAHDYLDAPEQLDRDWVLEQLKPILEDDAQAKVGQ
NLKYDASVLARYGIEMKGIKYDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQIAGK
GKNQLTFNQIELEQASPYAAEDADVTLRLHNRLFANIEQDEKLKSVYEEIEMPLVPVLSR
IERTGVLIDDMKLSAQSVEIAARLEELEQKAYEIAEQEFNMNSPKQLQAILFEKMGLPVV
KKTPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINPSTGRVHTSY
HQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAPAGYKVLAVDYSQIELRIMAHLSG
DQALLDAFRDGKDIHAATAAEIMGVSIDQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGI
PRGEAQAYMDKYFERYPGVMQYMEDTRSAAADKGYVETIFGRRLHLPEIKSRNGMRRKAA
ERAAINAPMQGTAADIIKKAMLLVDQWIQEEGNGRVKLLMQVHDELVFEVEESSLSEIES
KVQKLMESAAELKVPLVAEAGHGDNWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtattcctgaaaatccgctgattcttatcgacggttcttcttacctatatcgc
gcttttcacgcttacccgggcacgatgagtaatggtgaaatcccaaccaacgcagtttac
ggtgtggtgaacatgctacgcagtatgatgcgtcaatttgcgtctgagcgtattgcggtg
gtgtttgatgcgaagggtaaaaccttccgtgatgagatgtattcagaatacaaagcgaat
cgtccaccaatgccggacgatctgcgttgccaaattgaaccattgcacaacgttattcgt
gcgatgggtttgccgttgatctgcgttcctggcgtggaagcagatgacgtcatcggtacg
ttggcttaccaagcctcgcaacaaggcatgcctgttttaatcagtactggcgataaagat
atggctcagctggtggatgacaacattaccttgatcaacaccatgacgaacgtagtgatg
gatcgtgaaggggtggtggaaaaatttggtattccgccagagttgataatcgactatcta
gcgttgatgggcgataaagtcgataacatccctggtgttccgggtgtgggcgacaaaacg
gcgactgctttgctgcagggcattggtggccttactaagttgtacgaaaatctggatgat
atcgcggcacttggtttccgcggttcgaaaaccatggcgaagaagctggtcgacaacaaa
gacaacgctatgctgtcttatgagctggctaccatcaagctggatgtggaactggaagaa
acaccagagtcgctactgaaagcagagccaaacaaagacgaattgatcaaactgtatggt
cagttgacgtttaagtcttggctgaacgaattgcttgaaggcggctcaggcactgtcgaa
gcggttgagcttgcaggctctgcgcaagcatcatcatcttcttcgcatgctgaaatggaa
acctcagcggtaacgattgatcgcagtcagtacgaaaccattttggacgaagcttctttc
aatgcgtggctagaaaaactcaaagcggcagagctgtttgcctttgataccgaaacggac
agccttgattacatggtggcgaacctcgtcggtttgtcatttgctatcgatgaaggtatg
gcggcttatgtccctgtcgcacacgattatttggatgcgccagagcaactggatcgcgat
tgggttcttgagcagctgaaaccgattcttgaagacgacgctcaagcgaaagtcggtcag
aacctaaaatacgatgcgtctgtgctggcacgttacggcatcgagatgaaaggcatcaaa
tacgacaccatgttggcgtcttacgtttacaacagcgtaggcggcaaacacgacatggac
agcttggcacttcgtttcctacaacacagctgcatttcattcgaacaaatcgcgggtaaa
ggtaaaaaccaactgaccttcaaccaaattgagcttgagcaagcatcgccatacgcagca
gaagatgcagacgtcacgcttcgtctgcacaatcgtctgtttgctaacatcgaacaagat
gaaaagttaaaatcggtttacgaagaaatcgaaatgccgctagtccctgttttgtctcgc
attgagcgcactggtgttctgattgatgacatgaaactgagcgctcaatcggtagaaatc
gcagcccgtttagaagagcttgaacaaaaagcttacgaaatcgcagaacaagagttcaac
atgaactcgccgaagcagctgcaagctatcctatttgaaaaaatgggcctacctgttgtg
aagaagacaccatctggcaccccttcaaccaatgaagaggtgttgcaagagcttgcgttg
gattacccactgccaaaactgattttagaataccgtggtttagcgaagctgaagtcgaca
tacacagacaagctgccgaagatgatcaacccttcaactggtcgtgtacacacctcttac
catcaagcggtgactgcgacaggtcgtttgtcgtctactgatccaaacttgcagaacatt
ccaatccgtaacgaagaaggtcgtcgtattcgtcaggcgtttgtagctcctgctggttac
aaggttctggctgtcgactactcgcaaatcgagctgcgtattatggcgcacctttctggc
gaccaagcgctgcttgatgccttccgtgacggtaaagacattcacgccgcaaccgcagca
gaaatcatgggagtgtctattgatcaggtatcaagtgagcagcgtcgccgtgcaaaagcg
gtgaactttggtctgatttacggcatgagcgcattcggcttggcaaaacagctgggcatt
cctcgtggtgaagcgcaagcatatatggacaagtacttcgagcgttacccaggtgtaatg
cagtacatggaagacacgcgcagcgcagcagctgataaaggttatgtagaaaccattttt
ggtcgacgtttgcatctgccagaaatcaaatcgcgtaatggtatgcgtcgtaaagcagca
gaacgagcggcgatcaatgcgccaatgcaaggcactgcagcggacattattaagaaagcg
atgctgctagtggatcaatggattcaagaagaaggcaatggtcgcgtaaaacttttgatg
caagtacacgatgaactggtatttgaagtcgaagagtcgtctttgtccgaaattgaaagt
aaagtacaaaaattgatggaatctgcagcagagttgaaagtgcctttggtggcagaagct
ggtcacggtgacaactgggatcaagcacactaa
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