KEGG   Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_21620
Entry
M636_21620        CDS       T02760                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:vpk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpk03400]
    M636_21620
Enzymes [BR:vpk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     M636_21620
DNA repair and recombination proteins [BR:vpk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    M636_21620
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 ResIII
Other DBs
NCBI-ProteinID: AGQ99547
LinkDB
Position
I:complement(2873720..2875735)
AA seq 671 aa
MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA
REMKERVGQTLGKAESKGLMVSTFHTLGLNIIKREYKQLGLKAGFSLFDDQDQMALLKEL
TEKQLDGDKDLLKQLLSTISNWKNDMLTPEQAKAMAQGEQQQLFAFCFEMYQKQMKAYNA
LDFDDLILLPVLLLRNNEDVRQRWQNRIRYLLVDEYQDTNTSQYELVKLIVGERGRLTVV
GDDDQSIYSWRGAKPQNLVLLGQDYPNLRLIKLEQNYRSTSRILRAANILIANNPHVYEK
SLFSEIPDGEKLKVLLAKNEEHEAERVTGELIAHKFLNRTEYRDYAILYRGNHQSRLIEK
SLMQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPRREIGPVTLEK
LGSYANMRGKSLFEASFEMGLEQHLSGRGLENLRRFTQWLVAIADQAERGNTVEAVRSLV
RDIHYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNYDQEEKTLKEVVQRLTLRD
MMERGEEDEDSDAVQLMTLHASKGLEFPYVYLIGSEEGILPHQTSIDEDNVEEERRLMYV
GITRAQRELTFTMCKERRQFGELIKPTQSRFLDELPFDDVEWEVNKKPVSQEERMAKGQA
HIANLRSMFKK
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaagctgaaccctagacaagatgaagccgtaaaatacgtgtctggtccatgcctagtg
cttgccggcgcaggctcaggtaaaacgcgcgtaattactaataaaattgcttacttggtt
cagcaatgtggctacaaagcaagaaacatcgcggccgtgacctttaccaacaaagccgcg
cgcgaaatgaaagagcgtgttggtcaaaccttgggtaaagccgagtcgaaaggtttgatg
gtttctactttccataccttgggtttgaatatcatcaaacgtgagtacaagcagcttggg
ttaaaagcgggcttttcgttgtttgatgatcaagaccagatggcgctgttgaaagagttg
acggaaaagcaactcgacggtgataaagacctactcaaacaactattgagtacgatctcc
aactggaaaaacgacatgttaacgccagagcaagccaaagcgatggcgcaaggcgagcaa
caacagctgttcgctttttgttttgagatgtaccagaagcagatgaaggcgtacaacgcg
ctcgattttgatgacctgatcctgctgccagtattgctgctgcgtaataatgaagacgtg
cgtcagcgttggcaaaatcgcatccgctatctattggttgatgaataccaagataccaac
accagtcagtatgaactggtcaaattgattgtgggtgagcgcggtcgcttgaccgtcgtg
ggtgatgatgaccaatcgatttattcgtggcgtggtgccaaaccgcaaaacttggtgctg
ctcgggcaagattacccgaacctgcgcctgatcaagctggagcagaactatcgctcgacc
agtcgaattcttcgtgctgcaaacattttgattgccaacaacccgcacgtgtatgaaaaa
tcactgttctcagagattcctgacggcgaaaaactgaaagtgttgctagccaagaacgaa
gagcacgaagcagaaagggtcacgggtgagttgattgcgcacaagttcttaaatcgcacg
gaatatcgagattatgcgattttgtatcgcggtaaccatcaatcgcgcttgattgaaaag
tcactgatgcaaaaccgcgtaccctacaaactgtctggcggtacgtcgtttttcgcgcgt
gccgaaatcaaagacatcatggcgtatcttcgagtgttggtgaacccggacgatgacaac
gcatttctgcgcattgtgaacacgccgcgacgcgaaattggcccggtaacgttagaaaaa
ttgggcagctacgccaatatgcgcggcaaaagcctatttgaagcaagctttgaaatggga
ttagaacaacacctatcggggcgtggtctcgaaaatctgcgtcgctttacacaatggttg
gtggcgattgccgatcaagctgagcgaggcaacacagtagaagctgttcgttccttggtt
cgtgacattcattacgaagattggctgtacgaaacctcagccagcccgaaagccgctgaa
atgcgcatgaagaacgtttcggatctctactcttggattgtggctgacttagaaggtgac
aattacgaccaagaagagaaaacgctgaaagaagtggttcaacgtttgaccttgcgtgac
atgatggaacgcggcgaagaagacgaagacagcgatgccgttcaattgatgacattacac
gcatcaaaaggtctagagtttccttacgtttatttgatcggttcggaagagggcatattg
ccgcatcaaaccagtattgatgaagataacgtcgaagaagagcgacgcttgatgtacgta
ggcatcacccgcgcacagcgagagctgacgtttaccatgtgtaaagagcgtcgccagttt
ggtgagttgatcaagccgactcaaagtcgttttttggatgagctgccgtttgatgatgtc
gaatgggaagtgaacaaaaagcctgtgtctcaagaagaacgaatggcaaaaggtcaggcg
cacattgcaaacctgcgctcgatgtttaagaagtga

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