Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_22355
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Entry
M636_22355 CDS
T02760
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00300
Lysine biosynthesis
vpk00470
D-Amino acid metabolism
vpk01100
Metabolic pathways
vpk01110
Biosynthesis of secondary metabolites
vpk01120
Microbial metabolism in diverse environments
vpk01230
Biosynthesis of amino acids
Module
vpk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M636_22355
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M636_22355
Enzymes [BR:
vpk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
M636_22355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGQ99663
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All DBs
Position
I:3026869..3028122
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAEEVPLQALAEQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV
KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDAKKVVFSGVGKTPAEMKRALELGI
KCFNVESEPELERLNKVAGELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP
EVYQFAQSLPNLNVQGIDCHIGSQLTSIDPFIDATDRLLALIDDLKAQGINIRHLDVGGG
LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVSPRNGEPQTYDLVGPICETGDFLGKDRALVLQE
GDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGNQSHLVRQREELTSLWQLEQILPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaactatcaggatgatggccaactttgggccgaagaggtcccacttcaa
gctcttgccgagcaatatggcactcctctttacgtatattctcgagccacgctagagcgc
cactggaaggcgtttgatagtgctgtgggtcaacatcctcatcttgtgtgctacgcagta
aaagccaactcaaacttgggcgtactgaacgcgctggctcgtttgggttcgggttttgat
atcgtatctggtggtgaactagagcgtgtgattgcagcgggcggtgatgcgaagaaagtc
gtgttttctggtgtgggtaaaacgccagcagaaatgaagcgcgcactagagcttggcatc
aagtgcttcaacgttgaatcagagccggaacttgaacgcttgaataaagtggcgggtgag
cttggtgtgattgcgcctatttcgctacgtattaacccagatgttgacgcgaaaactcac
ccttatatttcgactggtcttcgtgacaacaaatttggcattgcgtttgaccgcgcgcca
gaagtgtatcaattcgcccagagcctacctaatctgaatgtgcaaggtatcgactgccat
attggttctcagttaacgagcattgacccatttattgatgcaaccgaccgtttgctggct
ttgattgatgacctgaaagcacaaggcatcaacattcgtcacctcgacgttggtggtggt
ttaggcgtggtatatcgtgatgaattaccgcctcagccttctgattacgcgaaagcgttg
ttggggcgtcttgaaaatcatcaagacctagaactgatttttgaaccaggccgtgcgatt
gcagcaaacgccggtattttgctcacccgtgtggaattcctcaaacacactgagcataaa
aactttgccatcattgatgcggcgatgaatgacttgatgcgtccagcactgtaccaagct
tggcaagatattgtgcctgtttcccctcgtaatggtgagccacaaacttacgatttggtt
ggcccgatttgtgaaactggtgacttcttgggtaaagatcgcgcgctcgttttgcaagaa
ggtgatctactcgcggttcgttcagcaggtgcctatggttttgtgatgtcttcgaactac
aatactcgtacccgagcggcagaagtaatggtggatggtaatcaaagccaccttgttcgc
cagcgtgaagagctgaccagtttgtggcagctggaacagattctaccggagtaa
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